Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LGAS_1297 |
Symbol | |
ID | 4439486 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus gasseri ATCC 33323 |
Kingdom | Bacteria |
Replicon accession | NC_008530 |
Strand | - |
Start bp | 1289460 |
End bp | 1290266 |
Gene Length | 807 bp |
Protein Length | 268 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 639673130 |
Product | uracil-DNA glycosylase |
Protein accession | YP_815098 |
Protein GI | 116629926 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0692] Uracil DNA glycosylase |
TIGRFAM ID | [TIGR00628] uracil-DNA glycosylase |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.00279375 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 102 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCCATCCA TATCGCTTGC AATAAGTTTA ATCATTTTAA GTCCTCCGAT CTTTTATCTA TATGATATCA TGAACTTGGA TTTCTTAGAG ATACAAGAGG ATAGAATAAA TATGAAAAAA TTAATTGGAA ATGATTGGGA TGAAATTTTG GCACCCGCTT TTGAGAGTGA ACAGTATCAA AAATTACATG ATTTTCTAAA AAGTGAATAT CGAACAAAGC AGATTTTTCC AGATATGTAT CACATTTTTA CTGCTTTTAA GTTAACTTCT TTTGCAGATA CGAAGGTTGT GATCTTAGGT CAAGATCCTT ACCATAACCC TGGCCAAGCC ACAGGGATGA GTTTCAGCGT TAATCCTGGG GTTGCTTTGC CACCATCGTT AAAAAATATC TATAAAGAAT TATATGATGA TGTTGGTGCC ATCCCAGTAA ATCATGGCTA TTTGAAAAAG TGGGCGGATC AAGGAGTTTT ATTGCTTAAT GCAGTATTAA CAGTGCCTTA TGGAAATGCT AATGGTCATC AGGGAAAAGG CTGGGAAATA GTCACTGATG CAGCTATTAA AGCTCTTAGT GATCGCGGAA AAGTTGTATT TATTTTGTGG GGAAGATTTG CCCAAAATAA AATTCCTTTA ATTGATGAAG AAAAGAACGT AATTATCAAG TCTGCACACC CTAGTCCTTT TTCAGCAGAC CGTGGTTTCT TTGGCTCTCG TCCGTTTTCT AGATGTAATG ATGCCTTGAC TAAATTTGGT GAGAGTCCAA TTGATTGGCA ATTGCCACAG GAAGTAAGTC AATCAGATAT GGCATAG
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Protein sequence | MPSISLAISL IILSPPIFYL YDIMNLDFLE IQEDRINMKK LIGNDWDEIL APAFESEQYQ KLHDFLKSEY RTKQIFPDMY HIFTAFKLTS FADTKVVILG QDPYHNPGQA TGMSFSVNPG VALPPSLKNI YKELYDDVGA IPVNHGYLKK WADQGVLLLN AVLTVPYGNA NGHQGKGWEI VTDAAIKALS DRGKVVFILW GRFAQNKIPL IDEEKNVIIK SAHPSPFSAD RGFFGSRPFS RCNDALTKFG ESPIDWQLPQ EVSQSDMA
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