Gene LGAS_1251 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLGAS_1251 
Symbol 
ID4439541 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus gasseri ATCC 33323 
KingdomBacteria 
Replicon accessionNC_008530 
Strand
Start bp1249380 
End bp1250513 
Gene Length1134 bp 
Protein Length377 aa 
Translation table11 
GC content35% 
IMG OID639673088 
ProductBeta-lactamase class C related penicillin binding protein 
Protein accessionYP_815058 
Protein GI116629886 
COG category[V] Defense mechanisms 
COG ID[COG1680] Beta-lactamase class C and other penicillin binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000000135632 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones70 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGTAAGGC ACAGGATTCT GGTTCCTGGA TGTTTCGGTT CGAGCCCGAA TATCTCAATA 
TGTTACCGTC AGATCGTTGA TCTGGCGGTT TTATTTTATA ATCCAGGTGG TAGGATGATA
GAATTTTTTA AAACTCAGCA TTTAATTGAA AGTATGGTTA GTGAACGCAT TGTACCAGGG
GTAAACTACG CATTTATTAA GAAAAAACAG GTGTTTACAT CAACAGTAGG TTTTGCTAGT
TTGATGCCTG AGATTGAACA ACTTAGTCCA TTTGCACTTT ATGATTTAGC AAGTTTAACT
AAGGTGTTAG GGACTACTAA TGTTTTTTTA AAATTAAAAG AAGAGGGTAA ACTTAATTTT
ACTGAGCCAC TTCAAGAGTT TATTCCTGAA TTTAAAGATG ATCGTATTCG CCTTAGTCAT
TTATTGACGC ATACTAGTGG AATTCGTGGT TGGATTCCTA ATCGAGATGA ACTAGCAGCT
CCTGATTTAC TAAAAGCAAT TATCGGCTTA CCAGTTACTG ATGAATTTGA AACAAAAATG
CGGTATGCAG ATACCAATTT TATTTTATTG GGATTGGTAC TTGAAAAAAT ATATGGTTTA
CCTGTCCAAG ATGTAATTAT GCAGGAGATT ATTTTACCAG CTAAGTTGAA GGAAACAACG
TTTCATCCAA AAGCATCTGA TTGTGTGCCT ACTGCTTATA CTGAACAAGG TGAGTTACTG
CAAGGAATTG TACATGATCC TAAAGCACGT GTACTGGGTA AGGATTGTGG GTCAGCTGGC
TTATTTTCAA ACTTAGAAGA TCTAATAAAA ATGACGCAGG CTTATTTAGG ACTACGTCAT
GATATTCTAC CTTTAAAGCA GGATACATTA GCTAACTTAT TTCAAATTGA AACACCTAAA
AACGTACATC CTCGTTCTTG GGGATGGGAT TTACGCTTTG ATCCAGTTGA TCAGCATCCA
CTTATTTATC ACACAGGTTT TACTGGTACT TTTATCTTAA TTGATCGCCT TAATCAAACT
GCGATGGTTG TTTTAACTAA TCGAATTCAT CCTAGTGGAC ATAATCATGT CTTTCTAGCG
ATGAGAGAAA AAATAGTTGA TACTTTTCTA AAAGAAAATA TTTATAAAGG CTAA
 
Protein sequence
MVRHRILVPG CFGSSPNISI CYRQIVDLAV LFYNPGGRMI EFFKTQHLIE SMVSERIVPG 
VNYAFIKKKQ VFTSTVGFAS LMPEIEQLSP FALYDLASLT KVLGTTNVFL KLKEEGKLNF
TEPLQEFIPE FKDDRIRLSH LLTHTSGIRG WIPNRDELAA PDLLKAIIGL PVTDEFETKM
RYADTNFILL GLVLEKIYGL PVQDVIMQEI ILPAKLKETT FHPKASDCVP TAYTEQGELL
QGIVHDPKAR VLGKDCGSAG LFSNLEDLIK MTQAYLGLRH DILPLKQDTL ANLFQIETPK
NVHPRSWGWD LRFDPVDQHP LIYHTGFTGT FILIDRLNQT AMVVLTNRIH PSGHNHVFLA
MREKIVDTFL KENIYKG