| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LGAS_1220 |
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| Symbol | |
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| ID | 4439578 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactobacillus gasseri ATCC 33323 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008530 |
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| Strand | - |
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| Start bp | 1220842 |
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| End bp | 1223469 |
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| Gene Length | 2628 bp |
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| Protein Length | 875 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 639673057 |
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| Product | cation transport ATPase |
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| Protein accession | YP_815027 |
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| Protein GI | 116629855 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0474] Cation transport ATPase |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type
[TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01517] plasma-membrane calcium-translocating P-type ATPase
[TIGR01523] potassium and/or sodium efflux P-type ATPase, fungal-type |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 95 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAAGCAT ACTATCGTGA AAGCAAAGAA GAGCTTATCA AAGAATTAGG AGCTAATGAA
GAGCAGGGGC TAACTAATAA AGCTGCTCAA GAAAAATTAA CGCAAGTAGG ACCAAACGCT
TTAGTAGAAG GCAAGAAAAA AAGTGTTTTA GAAGTCTTTC TAGAGCAATT TAAAGACTTA
ATGGTCATTA TTTTGATTGT TGCCGCTGTG ATTTCTGCAT TTACTGGCAA TTTAGAAAGT
ACAGCAGTTA TTATTGTCGT TTTAATTTTG AACGCAATTT TAGGAACGGT ACAACATGTT
AAAGCTGAAA AATCATTAGA AGCTTTAAAA TCTTTGTCAG CACCTGTGGC AAAAGTTTTA
AGGGATGGTA AAAAAAAAGA AATTGCCGCA AAAGATGTTG TTCCTGGCGA TATTCTTTTA
CTTGAGGCAG GAGATCTAGT TACTGCTGAT GGTAGGATTT TAGATAACTT TTCATTACAA
GTAAATGAAA GTTCCCTAAC TGGTGAATCA ACTAATATTG ATAAGTTAGA TACAACATTT
GATAAAGAAG TTCCTTTGGG TGATCGAGTA AACATGGTTT ACTCTAGTTC GCTTGTAACG
TATGGACGCG CAAATATTTT GGTTACAGCA ACTGGAATGG ATACTGAAAT TGGTAAGATT
GCCACCTTGA TGAACGAAAC TAAGGAGCGT AGAACGCCTC TTCAAGTTTC ACTTGATCAA
TTTTCATCGC GCTTGGCAAC TGCAATTTTA ATTTTCTGTG CCTTAATCTT AGGACTTCAA
ATGTGGCGTG GTCAGCCTTT ACTAGATGCG TTATTATTTG CAGTAGCACT AGCTGTTGCA
GCTATTCCAG AAGCTTTGAG TTCAATTGTT ACAATTGTTC AAGCTATGGG AACTCAAAAA
ATGGCTAAGG AACATGCTAT TATCAAAAAT TTAGCAGCAG TTGAATCACT AGGTTCAGTT
TCAGTAATCT GTTCTGATAA AACCGGTACT TTAACTCAAA ATAAAATGAC TGTTGAAGAT
ATTTATATTG GCGGCGAAGT TCTTAAGCCA GAAGAACTTA ATCTAAGTAA TCAATTGCAC
CGCTATTTAC TATACGATGT AGTTTTGAAT AATGATGCTA GTTTGTCAGA TGGAAAGAAG
ATTGGTGACC CAACAGAATC AGCTTTGCTT GAAATGTATC GCAAAGTTCC AGGCATTAAT
CTTGGGAATG GAAAGTTAGG TTTATCGGAA AGTGAATTAA GAAATCACTT GGATCGCTTA
GAGGAAGTAC CATTTGACTC TGACCGTAAG TTAATGAGTA CTAAGCATCT AATTCATACT
ATTCCAACAA TTTTTGTTAA AGGAGCAATC GATGTCTTGC TTAAGCGCTG CATTAATATT
CGTTTTGGGG ATGAAGTGCG GCCACTAACT GAGCAAGACC GAAAAAATAT TTTGGCTCAA
AATAATCATT TTTCAGAGAA TGGGTTAAGA GTATTGGCTT TTGCTTATAA GGAAAGCGAT
GAAGAATTAT CTACTGATAC TGAAAAAGAC TTGACTTTCA TTGGTTTAGT TTCAGAAATG
GATCCACCGC GAGAAGAAAG CGTCGCAGCC GTTGCTCGCG CAAAAGAGGC CGGTATTAGA
ACAGTGATGA TTACGGGTGA TCATAAGGTT ACTGCAGTAG CAATTGCTAA AAAGATTGGT
ATCTTTACAG ATGGAGACTT GGCATTAACT GGCTTAGAAT TAGATGCCCT AAGCGATGAA
GAATTAGATC AACAAATCGA AAAAGTTGCA GTATATGCTC GTGTTTCTCC AGAAAATAAG
ATCAGAATTG TTAATGCCTG GCAAAGAAAG AACCACATTG TATCAATGAC TGGTGATGGT
GTTAATGACG CACCGGCTCT TAAAAAAGCT GACGTTGGAG TTGCCATGGG AATTACTGGT
ACTGAGGTAT CTAAAGATGC CGCAAGTATG ATCTTAACTG ACGATAACTT TGCTACAATT
ATCAAGGCTG TCGCTAATGG TAGAACTGTT TATGAAAATA TCAAAAATGC AATTGGCTAC
TTACTATCAG GTAACTTATC GGCAATTATT ACAGTTCTTT TTGCCTCAAT TGCCGGATTG
CCAGTACCAT TTGTTGCAGT ACAACTTTTA TTCATCAACT TAGTGACTGA CTCTCTTCCA
GCTTTAGCGA TTGGAATGGA GCCAGGAAAT CCGGATATTT TAAAACGTAA ACCACGTGAT
CCTAAAGCTA GCTTGTTAGA CAAACCATTT GTTACTCAAA TAAGTACGCA AGGCTTCTTA
ATTTCATTGA GTGTCATTGC AGCCTTCTTA ATTGGTTTGA AAGATAGTCC TGCAATTGCA
TGTACAATGG CATTCTCAAC CCTAACCTTT GCCCGTTTAC TTCATGGCTT TAATTGCCGC
TCACAACATA GCATTTTTAA AATTGGATTT AAAAACAATT GGTACAGTTT AGCAGCCTTT
GCATTGGGCA CTGCACTTTT AGCCTTAATT CTCTTTGTAC CAGCACTGCA TGGCTTATTT
GCTGTTCAAC CATTAAGTGG ACAAGAAGTT TGGCTAATCG TGATTTTAGC AATTATTCCG
ACAGTTTTAA TTCAGTTGGT AAAAGTAATC AGAGAAAATA GAGGTTAA
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| Protein sequence | MKAYYRESKE ELIKELGANE EQGLTNKAAQ EKLTQVGPNA LVEGKKKSVL EVFLEQFKDL
MVIILIVAAV ISAFTGNLES TAVIIVVLIL NAILGTVQHV KAEKSLEALK SLSAPVAKVL
RDGKKKEIAA KDVVPGDILL LEAGDLVTAD GRILDNFSLQ VNESSLTGES TNIDKLDTTF
DKEVPLGDRV NMVYSSSLVT YGRANILVTA TGMDTEIGKI ATLMNETKER RTPLQVSLDQ
FSSRLATAIL IFCALILGLQ MWRGQPLLDA LLFAVALAVA AIPEALSSIV TIVQAMGTQK
MAKEHAIIKN LAAVESLGSV SVICSDKTGT LTQNKMTVED IYIGGEVLKP EELNLSNQLH
RYLLYDVVLN NDASLSDGKK IGDPTESALL EMYRKVPGIN LGNGKLGLSE SELRNHLDRL
EEVPFDSDRK LMSTKHLIHT IPTIFVKGAI DVLLKRCINI RFGDEVRPLT EQDRKNILAQ
NNHFSENGLR VLAFAYKESD EELSTDTEKD LTFIGLVSEM DPPREESVAA VARAKEAGIR
TVMITGDHKV TAVAIAKKIG IFTDGDLALT GLELDALSDE ELDQQIEKVA VYARVSPENK
IRIVNAWQRK NHIVSMTGDG VNDAPALKKA DVGVAMGITG TEVSKDAASM ILTDDNFATI
IKAVANGRTV YENIKNAIGY LLSGNLSAII TVLFASIAGL PVPFVAVQLL FINLVTDSLP
ALAIGMEPGN PDILKRKPRD PKASLLDKPF VTQISTQGFL ISLSVIAAFL IGLKDSPAIA
CTMAFSTLTF ARLLHGFNCR SQHSIFKIGF KNNWYSLAAF ALGTALLALI LFVPALHGLF
AVQPLSGQEV WLIVILAIIP TVLIQLVKVI RENRG
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