| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LGAS_1077 |
|---|
| Symbol | |
|---|
| ID | 4439715 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Lactobacillus gasseri ATCC 33323 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008530 |
|---|
| Strand | - |
|---|
| Start bp | 1080491 |
|---|
| End bp | 1081549 |
|---|
| Gene Length | 1059 bp |
|---|
| Protein Length | 352 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 639672918 |
|---|
| Product | aspartate-semialdehyde dehydrogenase |
|---|
| Protein accession | YP_814888 |
|---|
| Protein GI | 116629716 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0136] Aspartate-semialdehyde dehydrogenase |
|---|
| TIGRFAM ID | [TIGR01296] aspartate-semialdehyde dehydrogenase (peptidoglycan organisms) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.00000750093 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 90 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAG AATTTACGGT TGCTATCTTA GGTGCAACTG GGTTAGTGGG ACAGCGAATG
ATCAAGCAAC TTGAACAGTC CACTGTTCCA GTTAAAAAAG TTAAATTTCT AGCTTCTAAA
AGATCTGCTG GCAAGAAATT AAAATTCCAT AATCAAGAAG TTGAAGTTGA AGAAACTAAA
CCAGAATCAT TTTCCGGCGT TGACATAGTT TTATCTTCTG CTGGTGGAGC AGTTTCTAAA
AAGTTTTTGC CTGAAGCTGT TAAGAGGGGC AGTGTTTGCA TTGATAATAC TAGTGCATTT
AGAATGGATC CTGATGTTCC ATTAGTTGTT CCTGAAGTTA ATGGTGAAGA AATTAAAAAT
CATCATGGTA TTATTGCTAA TCCAAATTGT TCTACAATTC AAATGGTAAT GGCCTTAAAG
CCAATGATGG ATAAATTTGG CCTGAAGCGA GTAATTGTAT CAACTTATCA AGCAGCTTCT
GGTGCTGGGC ACGCAGCTTT AGAAGAGTTA TTCAAAGAAG CTAAAGACTA TATGGCAGGG
CGTGATATTA AGGAAGATGC CCAAGTTTTG CCTACAGCAG GAGATAAAAA GCATTATCCT
TTAGCCTTTA ACTTATTGCC CCAAATCGAT GTTTTTGAAG ATGATGGTTA TAGTCATGAA
GAATGGAAGA TGATTCACGA AACTAAGAAG ATTCTCTTAA ACGATATGGA TGCAGCTGAT
ATTAAAGTAA CTGCTACTTG TGTTCGTGTT CCCGTTGAAA TTGCGCATGG AGAAAGTGTT
TATTTTGAAT TGGCAGATAA AAATGCTACT GTATCTGATC TAGAGAAGGT TTTAAAAGAC
TTCCCAGGAG TTCAAGTACA GAATGATTTT AGAAAACAAG AGTATCCTCA ACCATTAAAT
GCAGTTGGAT CTAACGATAC TTTTGTTGGT CGAATTAGGC CAGATTTAGA AACAGCCGGT
GCCTTTAATA TGTGGGTTGT AGCAGATAAT TTATTAAAAG GTGCAGCTGG AAATACTGTT
CAAATTGCTG AAAAGCTAGT TGCTAATGAT TGGTTATAA
|
|---|
| Protein sequence | MKKEFTVAIL GATGLVGQRM IKQLEQSTVP VKKVKFLASK RSAGKKLKFH NQEVEVEETK
PESFSGVDIV LSSAGGAVSK KFLPEAVKRG SVCIDNTSAF RMDPDVPLVV PEVNGEEIKN
HHGIIANPNC STIQMVMALK PMMDKFGLKR VIVSTYQAAS GAGHAALEEL FKEAKDYMAG
RDIKEDAQVL PTAGDKKHYP LAFNLLPQID VFEDDGYSHE EWKMIHETKK ILLNDMDAAD
IKVTATCVRV PVEIAHGESV YFELADKNAT VSDLEKVLKD FPGVQVQNDF RKQEYPQPLN
AVGSNDTFVG RIRPDLETAG AFNMWVVADN LLKGAAGNTV QIAEKLVAND WL
|
|---|
| |