Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LGAS_1025 |
Symbol | |
ID | 4439770 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus gasseri ATCC 33323 |
Kingdom | Bacteria |
Replicon accession | NC_008530 |
Strand | + |
Start bp | 1026210 |
End bp | 1028585 |
Gene Length | 2376 bp |
Protein Length | 791 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 639672868 |
Product | membrane carboxypeptidase (penicillin-binding protein) |
Protein accession | YP_814838 |
Protein GI | 116629666 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0744] Membrane carboxypeptidase (penicillin-binding protein) |
TIGRFAM ID | [TIGR02074] penicillin-binding protein, 1A family |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 82 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAGATA ACAATCAAAA GCCAACTAAT TCTAGAATGG CTAACCTTCA CCCCGAAGGT AAACCGCGTA AAAAAATTTG GCTACAAATA ATTAAATGGT TCTTTATTGT AGCAATGTTA ATCATCGTTT CTGGGGTAGG ACTATTTGCG TATTACGCTA AAGACGCTCC TAGCATTTCA CAAGCTCAAC TTCAAAGCGG CGGAACGAGT AGCCTTTATA CTCGAGATGG AAAATTTCTT CTTTCTTTAG GTTCTGAAAA AAGGACTTAC GTCAATAATG ATGAAATTCC TAAAGAGCTC AAAAATGCTA TTGTCTCTGT CGAAGATAGA CGTTTTTATA AAGAAGGAAT TGGACTTGAC CCAATTCGAA TTGTTGGCTC TGTCCTAGTT AACGCTAAAA GTAAAGGCGT TGCTGCCGGT GGATCAACTA TCACTCAACA ATTAGTTAAG CTTTCTGTTT TTTCAACCGC TGCTTCGCAA AGAACCCTTC GAAGAAAAGC CCAAGAAGCA TGGCTCTCAA TGAAAGTTGA ACGAGAATTT AGTAAAGAAC AAATTTTAGA GTTCTATATT AATAAGGTAT ACATGAATTA CGGTAACTAT GGAATGGGTA CTGCAGCAGA TTTTTACTAT GGCAAGGATC TAAAGGATCT TGACTTAGCA CAAACTGCCC TTCTTGCAGG GATGCCTAAT GCACCAGTTA CCTATGACCC ATATGTTTAC CCAGAAAAGG CTAAGTATAG AAGAGATATT GTTTTAAGAG CAATGCTTAA AAACGATAAG ATTACTAAAT CCCAATATAC ACAAGCTGTT AATGAGCCAA TCACTCAAGG ATTACAACCT AAGAAGAACA ATGCAACTTC AGAACTAAGA AAGGTTGATG ATCCATACAT TAAAGAAGTA ATCAGCGAAG TTAAAAGCAA AGGATTTAAT CCTTATAATG ACAACTTAAA GATTACTGTT AATATTGATC AAGATGCTCA ACAAAAACTT TATGATCTAG TAAACAATGG ATCGGTTCCA TTTACTAACG ATAAGATGCA AGTTGGTGCA ACAATTATTG ATCCAAGAAC TGGACATGTT ATTGCCATTA TTGGCGGACG CAAGCTCCCC TCTGTTCAAT TAGGTTTAAA CCGCGCTGTT CAAACTGGCC GTTCAACTGG ATCCACTGTT AAACCGGTAT TAGACTATGG TCCAGCAATT GAATATCTTA ACTGGCCAAC TTCTCATATA TTAGATGATT CTAAGTATGT TTACCCTGGT ACTAATATTC AACTTTATGA CTGGGATAAT AAATACGAAG GCAAAATGAC TATGCGTCAT GCTCTAGAAC AATCAAGAAA CGTTCCTGCA GTTAAAACCT TAAGTAAGGT TGGGGTTGCA CGTGCATCAC TCTTTGCAAG AAAACTCGGC GTTAACGTTC CTTCTGATTC TGGCTTATCA GTCGCAATCG GGGCTAATGC TTCTTCTCTT CAAATGGCAG GAGCTTTTGG TGCCTTTGCT AATAATGGTG TTTACCATAA GCCACAATTT GTTTCTAAAA TTGAAACGCC AGATGGTTTA ACTAGAAATT ATGATAGCAG TGGTACTAGA GTCATGAAGG AATCAACAGC ATATATCATG ACTGATATGC TTAAGGGTGT GTTAACTAAA GGTTCTGGTA CACAAGCTCG AATTAAAAAC TTATATGAAG CGGGTAAAAC TGGTACTGTT AAATATTCAG ATGAAGAATT GGTAAAATAT CCTCAATACA AGAATTCGCC AAAAGATTCA TGGTTTGTTG GTTACACTAA ACTTTATTCA ATGGGGATTT GGACTGGATA TGATAATTTG AAAGATGGTA CCCCATCAGG CGTTGGCTCT TCTTCAGCTC AACTTCTATA TAAGCAAATG ATGTCTTATC TCATGACAGA CAAAGCTAAT AAAGATTGGA CAAAGCCAAG CACAGTTGTT AGACGCAGGA TTGCAAATGG TACCCAAGAT AAAGTAGTTT CTCCTACTGC AAGCAATTCA AGCTGGCAAT TATTTGTCAA AGGTCATGCA CCCAAAAATC CTTACAGTGA AGTAACCGTC GATAAACGGA AAGATGAAGA TGACGACGTT GACACAAGAT TTGATACGGA AGATGATACA TCATCTAAGG GGCAATCTCA TTCTCAAAGT AGCTCTTCAT CAAGTCATGC TGAACAACAA TCATCAAGTC AAAAGCAGTC ATCTACTTCT AATAACAATA ATTCAAATAA CCAGAATCAA AACAATAATC AGCAGACGGA AAATAAATCT AACAATCAAA ATAACAATTC CCAACAAAAT ACAAATAACC AAAATAATCA AAATCAACAA CAAAATCAGG GAAATAATTC CAATAATAAT CATTAA
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Protein sequence | MADNNQKPTN SRMANLHPEG KPRKKIWLQI IKWFFIVAML IIVSGVGLFA YYAKDAPSIS QAQLQSGGTS SLYTRDGKFL LSLGSEKRTY VNNDEIPKEL KNAIVSVEDR RFYKEGIGLD PIRIVGSVLV NAKSKGVAAG GSTITQQLVK LSVFSTAASQ RTLRRKAQEA WLSMKVEREF SKEQILEFYI NKVYMNYGNY GMGTAADFYY GKDLKDLDLA QTALLAGMPN APVTYDPYVY PEKAKYRRDI VLRAMLKNDK ITKSQYTQAV NEPITQGLQP KKNNATSELR KVDDPYIKEV ISEVKSKGFN PYNDNLKITV NIDQDAQQKL YDLVNNGSVP FTNDKMQVGA TIIDPRTGHV IAIIGGRKLP SVQLGLNRAV QTGRSTGSTV KPVLDYGPAI EYLNWPTSHI LDDSKYVYPG TNIQLYDWDN KYEGKMTMRH ALEQSRNVPA VKTLSKVGVA RASLFARKLG VNVPSDSGLS VAIGANASSL QMAGAFGAFA NNGVYHKPQF VSKIETPDGL TRNYDSSGTR VMKESTAYIM TDMLKGVLTK GSGTQARIKN LYEAGKTGTV KYSDEELVKY PQYKNSPKDS WFVGYTKLYS MGIWTGYDNL KDGTPSGVGS SSAQLLYKQM MSYLMTDKAN KDWTKPSTVV RRRIANGTQD KVVSPTASNS SWQLFVKGHA PKNPYSEVTV DKRKDEDDDV DTRFDTEDDT SSKGQSHSQS SSSSSHAEQQ SSSQKQSSTS NNNNSNNQNQ NNNQQTENKS NNQNNNSQQN TNNQNNQNQQ QNQGNNSNNN H
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