Gene LGAS_0970 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLGAS_0970 
Symbol 
ID4439819 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus gasseri ATCC 33323 
KingdomBacteria 
Replicon accessionNC_008530 
Strand
Start bp972841 
End bp973233 
Gene Length393 bp 
Protein Length130 aa 
Translation table11 
GC content30% 
IMG OID639672821 
Producthypothetical protein 
Protein accessionYP_814792 
Protein GI116629620 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.00613322 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones94 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATAATA TAAAGGAAAA TATTGTTTTA GCTTTCTTTG TAGGTTTATT TTTAGGAGCC 
ATTTCGATCT TTCTGGCTAT TGGTGGTGGA CCACTTAATG TGTCTCTATT CGTAATAATT
TTTCACTTCA CAATGAAGCA ATCTTCGGTT TATTCAATTG CAACGGTCTT TTTCTCACAA
ATTACCAAAA TCATTTCGAT TGTTGCTAGT GCACAATATC ATATGTTTGA TATGAAAATG
ATTCCTATGT TGATCATTGC TTCAATTATT GGCGGTTATA TTGGTACAGT TTGGAACCAG
AAAATTTCAT CAGCAAAATT GGAAAATCTT TATACAGTTT TCATGATTGC TATTACAGCA
ATTACTTGCT TTAATGTAAT TCATTTTATA TAA
 
Protein sequence
MNNIKENIVL AFFVGLFLGA ISIFLAIGGG PLNVSLFVII FHFTMKQSSV YSIATVFFSQ 
ITKIISIVAS AQYHMFDMKM IPMLIIASII GGYIGTVWNQ KISSAKLENL YTVFMIAITA
ITCFNVIHFI