Gene LGAS_0934 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLGAS_0934 
Symbol 
ID4439853 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus gasseri ATCC 33323 
KingdomBacteria 
Replicon accessionNC_008530 
Strand
Start bp927941 
End bp928702 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content36% 
IMG OID639672789 
ProductABC-type uncharacterized transport system, permease component 
Protein accessionYP_814760 
Protein GI116629588 
COG category[R] General function prediction only 
COG ID[COG0390] ABC-type uncharacterized transport system, permease component 
TIGRFAM ID[TIGR00245] conserved hypothetical protein TIGR00245 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value7.94066e-09 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones55 
Fosmid unclonability p-value0.313327 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAATG TCATGGTAAG TAATTGGTCG CTTGTCTTTG CTTTTGCATT GGTTTTAGTT 
TCGATTGCAA TTTCTGCTAA AGAAAAACTT GGTTTAACTA AAGACATTCT AATCAGCGTA
GTTCGAGCAA TCGTTCAGTT AATAGTTATC GGCTATGTTT TAAAGTTTAT TTTCCATGTA
AATAATTATT GGCTAACCTT TGCATCAACC TTAATTATTA TTTTTAATGC GTCGTGGAAT
GCTAATCAAA GAGACCCTAA TCCCGATAAA AAGTTTTATA ATTCTCTGAT TGCGGAAGCT
GCTGGTACAT ACGCCACTTT AGCGATCTTA ATTCTTTCAG GCGTGATTAA GCCAATTCCA
ATGCAAGTTA TTCCAATTAC AGGAATGATT GCAGGCAACG AAATGGTAGC TATTGGCTTG
TGCTATAAAT CTTTAAATGA AAGCTTTCGT GATTTACGGC AGCCGCTATT AGAGAAATTA
GCCTTGGGCA GTGATATTAA AACTGCTTCA ATGCCAATTC TAAGAAGAAG CATAAAAACT
GCGATGCAGC CAACGATCGA TTCAGCTAAG ACGGTTGGCT TAGTTAACTT ACCAGGGATG
ATGTCAGGAT TGATTTTTGC GGGAGTTAAT CCCATTTATG CTATTAAATA TCAAATTATG
ATTACATTTA TGCTTTTAGG AGCAACAAGT TTGGGAGCAG TGATTGCTGG ATATTTGGCC
TACCGAAATT ACTTTAATGA AAGAATGCAA TTAAAAGGTT GA
 
Protein sequence
MKNVMVSNWS LVFAFALVLV SIAISAKEKL GLTKDILISV VRAIVQLIVI GYVLKFIFHV 
NNYWLTFAST LIIIFNASWN ANQRDPNPDK KFYNSLIAEA AGTYATLAIL ILSGVIKPIP
MQVIPITGMI AGNEMVAIGL CYKSLNESFR DLRQPLLEKL ALGSDIKTAS MPILRRSIKT
AMQPTIDSAK TVGLVNLPGM MSGLIFAGVN PIYAIKYQIM ITFMLLGATS LGAVIAGYLA
YRNYFNERMQ LKG