Gene LGAS_0899 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLGAS_0899 
Symbol 
ID4439871 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus gasseri ATCC 33323 
KingdomBacteria 
Replicon accessionNC_008530 
Strand
Start bp892934 
End bp894124 
Gene Length1191 bp 
Protein Length396 aa 
Translation table11 
GC content29% 
IMG OID639672755 
Productrestriction endonuclease S subunit 
Protein accessionYP_814726 
Protein GI116629554 
COG category[V] Defense mechanisms 
COG ID[COG0732] Restriction endonuclease S subunits 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000681459 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.00000169581 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGAAGATA TAAAAATAAA ATTATTAGGA GAAATATGTG AATTTTATAG TGGGACGGGG 
TTCCCTAAAA AATTTCAAGG TAACTTAGAA GGAAAATACC CTTTTTATAA AGTTGGAGAT
ATTTCAAAAA GTGCGGATGA AAACAAAAAC TTTTTAACTA AATCTGATAA TTACGTAGAT
GAGAGAATAG TAAAGACGCT TAAAGGAAAG ATTGTTCCTC CAAAAACTAT CGTTTTTGCG
AAAATCGGTG AAGCTTTAAA GTTAAATAGA AGAATGATTA CTAGTACAGA ATGCTTGATT
GACAATAATG TGCTAGGGAT TAAGCCTAAA AACGATTCTA TTTTAGCTGA ATATATTTTT
TATTTTATGA AATTTGTAAA ATTAGAAAAT TATTCTGAAT CTACTACTGT ACCGTCTGTT
AGAAAAAGTG AACTTGAAAA GATAAAAATA AGAGTCCCTT CAATACAAAA TCAACAAAAA
ATTATAAGTA TTCTGGAAAA TATTGATAAA ACTAAAAAAA GTAAAACTGA AAGTTTAAAA
AAATTAAATG AGCTGATCAA AGCCCGATTT GTCGAGATGT TTGGAGATCC AGAAATAAAA
AATAAAGATA AAAGCTTAAA AAAATTATGT GATATTTGCT TAGTTAATCC TGATAAGAGA
AAAGATCCCA GACTAACTAA CAATGATTTA GAAGTATCTT TTGTCCCAAT GTCTGCTGTA
TCTGAAAATG GAGATATAGA TACCACTAAT ATCAAATTGT ACTCAGAAGT AAGGAAAGGA
TTTACATATT TCAGTTCTAA TGATGTCCTT TTTGCTAAAA TCACACCTTG TATGGAAAAT
GGCAAGGGAG CAATTGCACA GAATTTGAAA AATGATATTG GTTTTGGTTC TACTGAATTT
CATGTTTTAC GACCACTGGA AAACTTATCC AATCCTTATT GGCTATATGT GTTAACTACA
TTTGATAGTT TTAGAAAAGT AGCTGAGATA AATATGACTG GGAGTGCTGG TCAAAAAAGA
GTGCCAGTTA AGTTTCTTGA AAATTATAAA GTTAATATTC CTCCTCTTTC TCTCCAAAAC
GAATTTGCAA ACTTTGTCCA ACAAGTCGAC AAATCAAAAG TTGCAGTTCA AAAATCACTT
GATGAGACAC AAAAATTATT TGATAGCTTA ATGCAAGAAT ATTTTGGCTA A
 
Protein sequence
MEDIKIKLLG EICEFYSGTG FPKKFQGNLE GKYPFYKVGD ISKSADENKN FLTKSDNYVD 
ERIVKTLKGK IVPPKTIVFA KIGEALKLNR RMITSTECLI DNNVLGIKPK NDSILAEYIF
YFMKFVKLEN YSESTTVPSV RKSELEKIKI RVPSIQNQQK IISILENIDK TKKSKTESLK
KLNELIKARF VEMFGDPEIK NKDKSLKKLC DICLVNPDKR KDPRLTNNDL EVSFVPMSAV
SENGDIDTTN IKLYSEVRKG FTYFSSNDVL FAKITPCMEN GKGAIAQNLK NDIGFGSTEF
HVLRPLENLS NPYWLYVLTT FDSFRKVAEI NMTGSAGQKR VPVKFLENYK VNIPPLSLQN
EFANFVQQVD KSKVAVQKSL DETQKLFDSL MQEYFG