Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LGAS_0899 |
Symbol | |
ID | 4439871 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus gasseri ATCC 33323 |
Kingdom | Bacteria |
Replicon accession | NC_008530 |
Strand | + |
Start bp | 892934 |
End bp | 894124 |
Gene Length | 1191 bp |
Protein Length | 396 aa |
Translation table | 11 |
GC content | 29% |
IMG OID | 639672755 |
Product | restriction endonuclease S subunit |
Protein accession | YP_814726 |
Protein GI | 116629554 |
COG category | [V] Defense mechanisms |
COG ID | [COG0732] Restriction endonuclease S subunits |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0000000681459 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 0.00000169581 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGAAGATA TAAAAATAAA ATTATTAGGA GAAATATGTG AATTTTATAG TGGGACGGGG TTCCCTAAAA AATTTCAAGG TAACTTAGAA GGAAAATACC CTTTTTATAA AGTTGGAGAT ATTTCAAAAA GTGCGGATGA AAACAAAAAC TTTTTAACTA AATCTGATAA TTACGTAGAT GAGAGAATAG TAAAGACGCT TAAAGGAAAG ATTGTTCCTC CAAAAACTAT CGTTTTTGCG AAAATCGGTG AAGCTTTAAA GTTAAATAGA AGAATGATTA CTAGTACAGA ATGCTTGATT GACAATAATG TGCTAGGGAT TAAGCCTAAA AACGATTCTA TTTTAGCTGA ATATATTTTT TATTTTATGA AATTTGTAAA ATTAGAAAAT TATTCTGAAT CTACTACTGT ACCGTCTGTT AGAAAAAGTG AACTTGAAAA GATAAAAATA AGAGTCCCTT CAATACAAAA TCAACAAAAA ATTATAAGTA TTCTGGAAAA TATTGATAAA ACTAAAAAAA GTAAAACTGA AAGTTTAAAA AAATTAAATG AGCTGATCAA AGCCCGATTT GTCGAGATGT TTGGAGATCC AGAAATAAAA AATAAAGATA AAAGCTTAAA AAAATTATGT GATATTTGCT TAGTTAATCC TGATAAGAGA AAAGATCCCA GACTAACTAA CAATGATTTA GAAGTATCTT TTGTCCCAAT GTCTGCTGTA TCTGAAAATG GAGATATAGA TACCACTAAT ATCAAATTGT ACTCAGAAGT AAGGAAAGGA TTTACATATT TCAGTTCTAA TGATGTCCTT TTTGCTAAAA TCACACCTTG TATGGAAAAT GGCAAGGGAG CAATTGCACA GAATTTGAAA AATGATATTG GTTTTGGTTC TACTGAATTT CATGTTTTAC GACCACTGGA AAACTTATCC AATCCTTATT GGCTATATGT GTTAACTACA TTTGATAGTT TTAGAAAAGT AGCTGAGATA AATATGACTG GGAGTGCTGG TCAAAAAAGA GTGCCAGTTA AGTTTCTTGA AAATTATAAA GTTAATATTC CTCCTCTTTC TCTCCAAAAC GAATTTGCAA ACTTTGTCCA ACAAGTCGAC AAATCAAAAG TTGCAGTTCA AAAATCACTT GATGAGACAC AAAAATTATT TGATAGCTTA ATGCAAGAAT ATTTTGGCTA A
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Protein sequence | MEDIKIKLLG EICEFYSGTG FPKKFQGNLE GKYPFYKVGD ISKSADENKN FLTKSDNYVD ERIVKTLKGK IVPPKTIVFA KIGEALKLNR RMITSTECLI DNNVLGIKPK NDSILAEYIF YFMKFVKLEN YSESTTVPSV RKSELEKIKI RVPSIQNQQK IISILENIDK TKKSKTESLK KLNELIKARF VEMFGDPEIK NKDKSLKKLC DICLVNPDKR KDPRLTNNDL EVSFVPMSAV SENGDIDTTN IKLYSEVRKG FTYFSSNDVL FAKITPCMEN GKGAIAQNLK NDIGFGSTEF HVLRPLENLS NPYWLYVLTT FDSFRKVAEI NMTGSAGQKR VPVKFLENYK VNIPPLSLQN EFANFVQQVD KSKVAVQKSL DETQKLFDSL MQEYFG
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