| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LGAS_0892 |
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| Symbol | rpsA |
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| ID | 4439864 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactobacillus gasseri ATCC 33323 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008530 |
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| Strand | + |
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| Start bp | 883092 |
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| End bp | 884291 |
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| Gene Length | 1200 bp |
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| Protein Length | 399 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 639672748 |
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| Product | 30S ribosomal protein S1 |
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| Protein accession | YP_814719 |
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| Protein GI | 116629547 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0539] Ribosomal protein S1 |
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| TIGRFAM ID | [TIGR00717] ribosomal protein S1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.00000000000236762 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.00000000000000302812 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGACAGATA ATAGTAATCA ATTCTTAGAT GCTCTAAAAG AAATGCAGGG AGTTGAAGTC
GGCAACATTG TTAACGTTGA AGTTTTAAGT GTTGAAGATG GACAAATCGC TGTTGGTGTT
GAAAATGCAG GTGTTGAAGG TGTAATCACT AAACGTGAAT TCACTAACGA CCGTAACGCA
GATTTGAACC AATTGGTAAA ACCTGGTGAT AAGTTTGAAG CTTTAGTTCT TAGAAGAGCT
GGTGGCGATA AAGAAAACGG TGAATTCTTC TTCTCAGTTA CTCGTTTGAA GGAAAGAGAA
GCCTACAAGG AATTAGAAAA GGTCTTTGAA GAAGGCAAGA CTGTTGAAGG TACTGTAACT
GGTGCTGTTC GCGGTGGCTT ATTAGTTGAC GTTGGTACAC GTGGTTTCTT ACCAGCATCA
CTTATTTCTA ACCGTTACGT TTCTGACTTG AAGCCTTACA TTGGCAAGAA GATGAACTTG
AAGATCACTG AAATTGATCC TAACAAGAAC AGATTAATTC TTTCAAGAAA AGACTTAATC
GAAAAGGAAC GTGAAGAAGC ATTCGAAAAC GTTGCTTCAC AATTAGTTGT AGGTGATACT
GTTGAAGGTA AAGTATCACG TTTAACTGGT TTTGGTGCCT TTGTTGACGT TGGTGGTGTG
GACGGTTTAG TTCACATTTC AGAAATTTCT TACAAGCATG TTGACAAGCC AAGTGATGTA
TTGAAGGCTG GTCAAGATGT TAAGGTTAAA GTTATCGGTA TTGATGACGA TAGACACAGA
ATCTCCCTGT CAATTAAGCA AACTTTACCA TCCCCATTTG AAGAAGCTAC TGAAGGTTTA
CATGAAGGCG ACATCATTGA AGGTGAAGTT AAGACTTTAA CTTCATTCGG TGCATTCGTC
GAAGTAGCTG ATGGAATCCA AGGTTTAGTA CACGTTTCAG AAATTGCTAA CAAGCACGTT
GATAAGCCAA GTGATGTTTT AAAGGTTGGT CAAACTGTTA AAGTTAAAGT TTTGAGCGTT
GACCCAAGTG ACAGAAGAAT CTCATTGTCA ATCAAGCAAG CTGATCCTAA TGCTGCTAAG
AGTGAAAACT CACGTCCACG TCGTCGTCAA GATTCTGTAG CTGATAAGTA CATGAATGAC
AATGACAACG GTTTTGCTTT AGGTGACATT ATTGGTGATC AACTTAAAGA TAAGGATTAA
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| Protein sequence | MTDNSNQFLD ALKEMQGVEV GNIVNVEVLS VEDGQIAVGV ENAGVEGVIT KREFTNDRNA
DLNQLVKPGD KFEALVLRRA GGDKENGEFF FSVTRLKERE AYKELEKVFE EGKTVEGTVT
GAVRGGLLVD VGTRGFLPAS LISNRYVSDL KPYIGKKMNL KITEIDPNKN RLILSRKDLI
EKEREEAFEN VASQLVVGDT VEGKVSRLTG FGAFVDVGGV DGLVHISEIS YKHVDKPSDV
LKAGQDVKVK VIGIDDDRHR ISLSIKQTLP SPFEEATEGL HEGDIIEGEV KTLTSFGAFV
EVADGIQGLV HVSEIANKHV DKPSDVLKVG QTVKVKVLSV DPSDRRISLS IKQADPNAAK
SENSRPRRRQ DSVADKYMND NDNGFALGDI IGDQLKDKD
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