Gene LGAS_0879 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLGAS_0879 
Symbol 
ID4439886 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus gasseri ATCC 33323 
KingdomBacteria 
Replicon accessionNC_008530 
Strand
Start bp869959 
End bp870282 
Gene Length324 bp 
Protein Length107 aa 
Translation table11 
GC content35% 
IMG OID639672735 
Producthypothetical protein 
Protein accessionYP_814706 
Protein GI116629534 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.000000824643 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.000000596708 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
TTGCAAACTA ACTGTTCCCA TATGCTCACC CTTTCTAATA ATTTAAGTAT AGCAAATTCT 
CTCTTCTTGG CTTGCGTAAA GCTCTTATTT TTGCTAAGAT ACCTAGCGAA AGAAGGAGAA
ATTATGCGCT ATATTATTAC TATGGTTTGG TCATGCATTT TTTGCGAAGT TATCGGTTTT
ATCGCTGCAT CTTTAACTCA GATGCAATTT AATCCTATGC AATCTTTGAT TATTGGCGCA
GTCTTTGGCT TGCTATTCGC AATTATTATT CCCGCCATTA CTGCTAAGAG TTACAAAGAC
AAGAGTAAGT ACAATAAACT TTAA
 
Protein sequence
MQTNCSHMLT LSNNLSIANS LFLACVKLLF LLRYLAKEGE IMRYIITMVW SCIFCEVIGF 
IAASLTQMQF NPMQSLIIGA VFGLLFAIII PAITAKSYKD KSKYNKL