| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LGAS_0826 |
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| Symbol | |
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| ID | 4439971 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactobacillus gasseri ATCC 33323 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008530 |
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| Strand | + |
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| Start bp | 810832 |
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| End bp | 813102 |
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| Gene Length | 2271 bp |
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| Protein Length | 756 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 639672683 |
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| Product | single-stranded DNA-specific exonuclease |
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| Protein accession | YP_814655 |
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| Protein GI | 116629483 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0608] Single-stranded DNA-specific exonuclease |
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| TIGRFAM ID | [TIGR00644] single-stranded-DNA-specific exonuclease RecJ |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00114457 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 72 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATGGC AACAAAGACA AGCAAGTAAT TTAGATCAAG AATTAATTGA GGATTATGGA
TTAACAGATA TTCAAGCTAA ACTCTTTGCA TTAAGAGGTA TTAATACCGC AGAGAAGCTA
GATTTTTGGT TAAATGCAGA TGAAAATGAT TTGGCTGATC CTTTTTTAAT GCATGATATG
GAAAAGTCTA TTAATCGTAT TAATCAGGCA ATTGATAATG GTGAAAAAAT AACTATTTAT
GGTGATTATG ATGCTGATGG AATTACAGCA ACTAGCATTA TGATGGATAC CTTAGAAATC
TTAGGTGCCG ATGTTCACTT TTTTATTCCG GATCGTTTTA AAGATGGATA CGGTCCAAGT
ATGAGCCGTT ACCAAGAAAT AGTAGAAGAT GGTACAAAAT TAATTATCAC AGTTGATAAC
GGTGTGACTG GCGTTGAAGA AGTTAAATAC GCCCAAGAAC ATGGCGTTGA TGTAATATTA
ACTGATCACC ATACATTTCA GGATCAAAAA CCAGCCTCTT TTAGTACAGT TCACTGTAAC
TATCCTGGTC AAAAATATCC TTTTGATGAT TATTGCGGAG CCGGAGTTGC TTATACAATG
TGTCGGGCAT TAATGCAAGA TGCAATGCCA GAACTATTAG ACTTAGCCAT GATCGGAACT
ATAGGAGATA TGGTTAAGGT TACAGGTGAA GGACATATTA TCGTTAAGCG TGGTTTAGAT
ATTTTGAACC AAACAGAGCG TCCAGGCTTA CGTGCTTTAA TTAAGCAGGC TGGTTTAACC
ATGGGGCAAA TTACAGCAAC TGATGTCGGT TTTAATATCG CTCCTAGACT AAATGCTGTT
GTTCGTCTGG CAGATGCTAG TTTGGCGGTT GAACTACTTT TGAGTGACGA TGAAGAACAA
GCTGAAGAAA TAGCAACGAA AATAGAAGAA TTAAATAATG AAAGAAAAGA GCTTACAGCT
GAAGTTTATG AAAAATGTTT AGCCCAAGTT AAAGAAAAAG TTTGGCAGCA TCGAAATACG
CTAGTATTAT ATAGTCCAGA CTTTCATGAG GGTGTGTTAG GCTTAGTAGC TAATAAAGTT
GTTGAAAAGC TTCATAAACC GACTCTTGTT CTTACTAAGG ATGAAAATGG TGAGTTAAAA
GGCTCAGGTC GGTCAAGCAA CGGCTTTAAT TTATTTGATA CTTTAGAGCC AATGAAAGAT
GATTTTTTAG ATAAATTTGG CGGACATGAT TTTGCCTGTG GCTTATCTTT GAAAGCTGAT
AAACTTGAAG AACTGCGTTC ACGTTTTGAA AAAAGCTTTA AGCCAAATAC GGATCTTGAA
GTAAAAGATT TCGATTTTGA ATTAAATTTA AGAGAAGTTA CGCCAGATAC ATTAACGGAA
ATTAATTTGG TCGGTCCCTT TGGAACAGGA AATCCCGAAC CAGTATTTAG TATCAGCGAA
CCGCACATCA AGAGCCTATT TAAGATGGGA AAAGATAAGA ATCATGTGAA GTTTACTGCA
GAAAAAAATA ATGGCAAACT AACAATTGTA GGTTTTAATA AAGGTTTTTT GAATCAGAAC
TTGCTTCCGT TTATTAAAGA ATTATATGTA ACTTTATCTC TCAATAGCTG GAAAAACGTT
TCTACTGTTC AAGGAATGCT GGCTGGAATT GAATATGGAG CACCTAAACT AGCAGTTTTT
GACCAAGTGA TTGACATGAG GCAAGAAGAT TATGTGATGG GATTTGCTGA CAGGTATTTG
ATTTTTGATA AGAATACTAT TTCTTGGGCT AGAAATGGTT TAGGAATTCC AGAGGAAAAG
CTTAGCCTTG CTAAAGATTA TCATGGAAAT TCTGAGATTG TAGCTTTATT AGATACTCCG
CGTAATCAAC TTGAATTAAA CACAGCTTTA GAAAATAAAT ATCATCAGCT CTACCTACGT
TTTTTATTTG ATAAATTACC AATTAATAAT TTGCCTAGTA GGGATGCTTT TGGTAAAACA
TTGAAATATA TTTATGCTCA CCCTAACTTG ACTATTGATG ATTATCAGGT GGTATCTTCT
TATCTTGGTT TGGATTATCA AGCTATTTTG TTTATTTTAA GAGTATTTTT TGAATTACGT
TTTGTTTCAT TTATTGATGG AAAAATTATT GGCAATAAGA GTCCTGAAAG CAAAAAATTA
ACAGCTTCAA GATATTTTAC TAGTGTAGCA TCACAGATTA AATTTAAAAA TCAGCTTAGA
ACAATGCCTA GTGATCAACT AATTAGTTAC GTTAAACAAT ATTTAAAGTG A
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| Protein sequence | MKWQQRQASN LDQELIEDYG LTDIQAKLFA LRGINTAEKL DFWLNADEND LADPFLMHDM
EKSINRINQA IDNGEKITIY GDYDADGITA TSIMMDTLEI LGADVHFFIP DRFKDGYGPS
MSRYQEIVED GTKLIITVDN GVTGVEEVKY AQEHGVDVIL TDHHTFQDQK PASFSTVHCN
YPGQKYPFDD YCGAGVAYTM CRALMQDAMP ELLDLAMIGT IGDMVKVTGE GHIIVKRGLD
ILNQTERPGL RALIKQAGLT MGQITATDVG FNIAPRLNAV VRLADASLAV ELLLSDDEEQ
AEEIATKIEE LNNERKELTA EVYEKCLAQV KEKVWQHRNT LVLYSPDFHE GVLGLVANKV
VEKLHKPTLV LTKDENGELK GSGRSSNGFN LFDTLEPMKD DFLDKFGGHD FACGLSLKAD
KLEELRSRFE KSFKPNTDLE VKDFDFELNL REVTPDTLTE INLVGPFGTG NPEPVFSISE
PHIKSLFKMG KDKNHVKFTA EKNNGKLTIV GFNKGFLNQN LLPFIKELYV TLSLNSWKNV
STVQGMLAGI EYGAPKLAVF DQVIDMRQED YVMGFADRYL IFDKNTISWA RNGLGIPEEK
LSLAKDYHGN SEIVALLDTP RNQLELNTAL ENKYHQLYLR FLFDKLPINN LPSRDAFGKT
LKYIYAHPNL TIDDYQVVSS YLGLDYQAIL FILRVFFELR FVSFIDGKII GNKSPESKKL
TASRYFTSVA SQIKFKNQLR TMPSDQLISY VKQYLK
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