Gene LGAS_0821 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLGAS_0821 
Symbol 
ID4440000 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus gasseri ATCC 33323 
KingdomBacteria 
Replicon accessionNC_008530 
Strand
Start bp804194 
End bp804772 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content39% 
IMG OID639672678 
Productheat shock protein GrpE 
Protein accessionYP_814650 
Protein GI116629478 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0576] Molecular chaperone GrpE (heat shock protein) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.085613 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones59 
Fosmid unclonability p-value0.503339 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGTAAAG AAGAGTTTCC GCATGAAAAA GATTTAAAAG ACGAGGTGAC CCCGGATAAG 
GCACCAAAGA AAGATCCCAA AGCAGCTTCG AAAGAGGAAG TTAAGGAAGA TCCAGCAAAA
GATTATGAAA AAGAAATCGC TGAATTAAGT GCTAAGAACA AGGATCTTGA AGATAAATAC
CTACGTAGTG AGGCTGAGAT CCAGAATATG CAGGCACGTT ATGCAAAAGA GCGTGCACAA
TTGATTAAAT ATGAATCTCA AAGCCTTGCT AAAGAAGTTT TGCCAGCAAT GGATAACTTA
GAACGCGCGT TAGCTGTTAA GGCAGATGAT GAGGCAGCTA AGCAACTCCA AAAAGGTGTT
CAGATGACGC TCGATTCATT AGTTAAATCA ATGAAAGATC AGGGAATCAC TGAAATTAAA
GCCGAGGGTG AAACTTTTGA TCCTGCACTC CATCAAGCTG TTCAAACTGT TGCAGCAGAA
AACGATGATC AGAAGGATCA CGTAGTTAAA GTTTTACAAA AAGGATATCA ATATAAAGAT
AGAACATTAA GACCAGCAAT GGTTGTAGTG GCTCAATAA
 
Protein sequence
MSKEEFPHEK DLKDEVTPDK APKKDPKAAS KEEVKEDPAK DYEKEIAELS AKNKDLEDKY 
LRSEAEIQNM QARYAKERAQ LIKYESQSLA KEVLPAMDNL ERALAVKADD EAAKQLQKGV
QMTLDSLVKS MKDQGITEIK AEGETFDPAL HQAVQTVAAE NDDQKDHVVK VLQKGYQYKD
RTLRPAMVVV AQ