| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LGAS_0820 |
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| Symbol | hrcA |
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| ID | 4439999 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactobacillus gasseri ATCC 33323 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008530 |
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| Strand | + |
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| Start bp | 803124 |
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| End bp | 804182 |
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| Gene Length | 1059 bp |
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| Protein Length | 352 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 639672677 |
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| Product | heat-inducible transcription repressor |
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| Protein accession | YP_814649 |
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| Protein GI | 116629477 |
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| COG category | [K] Transcription |
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| COG ID | [COG1420] Transcriptional regulator of heat shock gene |
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| TIGRFAM ID | [TIGR00331] heat shock gene repressor HrcA |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00000704325 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 59 |
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| Fosmid unclonability p-value | 0.585042 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTGACTG AACGGCAAGA ACTTATTTTA AAGACTATTA TCATGGACTT TACTCAGTCT
CATGAGCCGG TAGGTTCTAA GACCGTGATG AATCAACTGC CTGTCAAGGT CTCAAGTGCT
ACAGTTCGAA ATGAAATGGC GGCACTAGAA GAAAAGGGAC TGCTTGAAAA GACTCACTCT
TCAAGTGGGA GAATTCCTTC GACTGCTGGT TATCGATATT ACTTAGATCA TTTGATTAAT
CCAGTAAAGA TACCAGCATC CGTCTATAAC CGAATTATTT ATCAATTAGA CCAACCCTTT
CAACAAGTTA ATGAAATCGT ACAAGAAGCT GCAAAAATTC TGTCTGATTT AACTAATTAC
ACTGCTTTTG CCGCAGGTCC CGAAACTCGT TCGGTTAAAG TAACTGGTTT TAGGATCGTT
CCTCTTTCAA GCCATCAAGT GATGGCAATA TTAGTTACGG ATGACGGTAA TGTAAAGAAT
CAAATCTATA CTTTACCGCA TCATACAAAT GGGGAAGAGA TTGAAAAAGC AGTTCGACTA
ATTAATGATC AATTAGTTGG AAAGCCACTT AGTTCAGTTA ATGAAGTGTT ACTTAAGAGA
ATTGCAGATC ATCTGGTTGC TGGAGGCTCA GCACCTGAAA TTTTGGATTT GCTTCAAGAT
GTTATTAAGG ATGCTGCTAG TGAGCAAATG TATGTAGATG GTCAGATTAA TCTTTTGAGT
AATTATGAGA GCGATGATTT AGCTAAAGTT AAATCTCTCT ACAAATTAAT TGATCAAAAT
GATGCTATTT CAAGCTTGAT TGGTTTTAAT CCTAAAGATG AAATTAAAAA TGATTCAAAG
TCGAAAGTTC AAGTTAAGTT AGGCTCTGAA TTGCAATCAG ATTTACTTGA AGATTATAGT
TTGTTGACTG CACAATATAG CGTTGGTAAG TACGGTAAAG GAACAATAGC ACTACTTGGA
CCAACTAACA TGCCATACTC GCAGATGATC GGATTACTCG AGTATTTTAG GAACGAACTA
GCAAAGAAAT TGTTAGATTA TTATGGTAGA TTTAAGTAA
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| Protein sequence | MLTERQELIL KTIIMDFTQS HEPVGSKTVM NQLPVKVSSA TVRNEMAALE EKGLLEKTHS
SSGRIPSTAG YRYYLDHLIN PVKIPASVYN RIIYQLDQPF QQVNEIVQEA AKILSDLTNY
TAFAAGPETR SVKVTGFRIV PLSSHQVMAI LVTDDGNVKN QIYTLPHHTN GEEIEKAVRL
INDQLVGKPL SSVNEVLLKR IADHLVAGGS APEILDLLQD VIKDAASEQM YVDGQINLLS
NYESDDLAKV KSLYKLIDQN DAISSLIGFN PKDEIKNDSK SKVQVKLGSE LQSDLLEDYS
LLTAQYSVGK YGKGTIALLG PTNMPYSQMI GLLEYFRNEL AKKLLDYYGR FK
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