Gene LGAS_0778 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLGAS_0778 
Symbol 
ID4440027 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus gasseri ATCC 33323 
KingdomBacteria 
Replicon accessionNC_008530 
Strand
Start bp756104 
End bp757921 
Gene Length1818 bp 
Protein Length605 aa 
Translation table11 
GC content35% 
IMG OID639672635 
ProductABC-type oligopeptide transport system, periplasmic component 
Protein accessionYP_814607 
Protein GI116629435 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0747] ABC-type dipeptide transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000335108 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.00000000000176984 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGTTTGA TGATGATACT ATTAAACCAT CAACTTGTCC CAAATAGATG GAGGAATATA 
ACTATGAAGA AAGCCAAACT ATTTGGAAGT TTAACTTTAC TTTCTGGTGT TGCTTTAACA
TTAGCAGCAT GTGGTAACAA TTCAAATTCA AAAGTAGATA ACCCAACTAA GAGTTTTAAA
GAAGCTACTC CTAAGAAGGC CGTTAAGAAG GGCGGTACTG TAAGTGTAGC TCTTGAAACT
GATACTCCAA TTACCGGTAT CTTTTTAAAT GAACTTTCAG ATACTCAAAC TGACTCTGAT
GCAATGGCTC CTGGTAATGA AGCTTTATTT GATACAAATG ATACTTATCA AATTAATGAT
AAGGGACCTG CTACCTTAAA ATTAGATAAT AAAAATAAAA CTGCTACTAT CACCGTTAAA
AAAGGTGTAA AGTGGTCAGA TGGCAAGCAA GTAACTGCTA AGGATATTGA ATATTCTTAT
GAAATTATTG CAAATAAAGC AACAAAATCT TCTCGTTATA CTGAATCACT TCAAAATATT
GTTGGTTTAA GTGAATATCA CGATGGAAAA TCTAACACTA TTTCGGGTAT TGAAATGCCA
GATGGTGAAA ATGGTAGAAC TGTAGTACTT CACTTTAAGG AAATGAAACC TGGTATGAAG
TTTAGTGGTA ATGGTTATTT CTGGGAAGCT GCAGCACCAT ACCATTACTT AAAGGATGTT
CCATTTAATA AGTTACAATC CTCTGATCAA GTAAGAAAGA ACCCACTATT CTTTGGCCCA
TATAAGATGA GTAAGGTGGT TCGTGGTCAA GCCGTAACCT TTGTACCTAA TAAGTATTAC
TGGAGAGGTA CTCCAAAATT GGATAAGGTT ACTATTCAAG TTTTGAACCC TAACTCTGCT
TCTCAAGCTA TTAAGAGTCA CAAGTATGAT ATTGCGGGTG TTGTTAACTC GCAATGGAAG
AATGTGGCTA ATACCAATAA CGTTAACTGG ATTGCAAATA TTCCATTAGC TTACAGTTAC
TTAGGCTTTA AAGTAGGTAA GTGGGATGGA GCTAAAGGCG AAAACGTAAT GAATAAGGAT
GCTAAGATGA ACAATAAATC ATTACGTCAA GCTATTGCTT ATGGTATGAA TGTTTCTGCT
GTAACGAAAC GTTATACTAA TGGCTTAACT TTCCATATTC CAACTTTAAT TCCAAAACAA
TTTGGTAAAT ATTACGATAA GAATGTTAAA GGTTACGACT ACAATATCAA GAAAGGTAAT
GAAATTCTTG ATAAAGCAGG CTACAAGAAG AAGGGTAAAT ATCGTGTACA ACCAAATGGC
AAACCTTTAA CTATTCGTTT AGCCGCTATG ACTGGTAACT CTACCCAAGA GCCAATCATT
CAAAACTACA TTCAACAATG GAAGAAGTTA GGCTTGAATG TTAAGTTAAC TGGTGGCCGT
TTGATGGAAA TGAACTCCTT CTATAACAAG GTTCAAAATG ATTCTAAAGA CGTTGACATG
TTCATGGGTG CATGGTCATT ATCTTCAGAA CCATCACCAA ATGACTTGTA CAGTGTAAAG
GCTCCTTACA ACTTTACTCG TTTTGTAACT GCTAAGAATA CTAAGTTACT TCAGGAAATG
GATTCTGAAA AGTCATTTAA CACAAACTAC CGTGTCAAGA AGTTCCATGA ATGGCAAAAG
TACATGAATG ATGAAGCTTA TGTTGTTCCA GTATCTAACA GTTACAATGT AAATGCTGTT
AACAGCAAGA TTACTGGTTA CTCATTGAAA CCTTCAGCTG CCAACAGTCT TTGGTACAAT
GTTGGAATTG CAAAATAA
 
Protein sequence
MSLMMILLNH QLVPNRWRNI TMKKAKLFGS LTLLSGVALT LAACGNNSNS KVDNPTKSFK 
EATPKKAVKK GGTVSVALET DTPITGIFLN ELSDTQTDSD AMAPGNEALF DTNDTYQIND
KGPATLKLDN KNKTATITVK KGVKWSDGKQ VTAKDIEYSY EIIANKATKS SRYTESLQNI
VGLSEYHDGK SNTISGIEMP DGENGRTVVL HFKEMKPGMK FSGNGYFWEA AAPYHYLKDV
PFNKLQSSDQ VRKNPLFFGP YKMSKVVRGQ AVTFVPNKYY WRGTPKLDKV TIQVLNPNSA
SQAIKSHKYD IAGVVNSQWK NVANTNNVNW IANIPLAYSY LGFKVGKWDG AKGENVMNKD
AKMNNKSLRQ AIAYGMNVSA VTKRYTNGLT FHIPTLIPKQ FGKYYDKNVK GYDYNIKKGN
EILDKAGYKK KGKYRVQPNG KPLTIRLAAM TGNSTQEPII QNYIQQWKKL GLNVKLTGGR
LMEMNSFYNK VQNDSKDVDM FMGAWSLSSE PSPNDLYSVK APYNFTRFVT AKNTKLLQEM
DSEKSFNTNY RVKKFHEWQK YMNDEAYVVP VSNSYNVNAV NSKITGYSLK PSAANSLWYN
VGIAK