Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LGAS_0778 |
Symbol | |
ID | 4440027 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus gasseri ATCC 33323 |
Kingdom | Bacteria |
Replicon accession | NC_008530 |
Strand | + |
Start bp | 756104 |
End bp | 757921 |
Gene Length | 1818 bp |
Protein Length | 605 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 639672635 |
Product | ABC-type oligopeptide transport system, periplasmic component |
Protein accession | YP_814607 |
Protein GI | 116629435 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0000335108 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.00000000000176984 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGTTTGA TGATGATACT ATTAAACCAT CAACTTGTCC CAAATAGATG GAGGAATATA ACTATGAAGA AAGCCAAACT ATTTGGAAGT TTAACTTTAC TTTCTGGTGT TGCTTTAACA TTAGCAGCAT GTGGTAACAA TTCAAATTCA AAAGTAGATA ACCCAACTAA GAGTTTTAAA GAAGCTACTC CTAAGAAGGC CGTTAAGAAG GGCGGTACTG TAAGTGTAGC TCTTGAAACT GATACTCCAA TTACCGGTAT CTTTTTAAAT GAACTTTCAG ATACTCAAAC TGACTCTGAT GCAATGGCTC CTGGTAATGA AGCTTTATTT GATACAAATG ATACTTATCA AATTAATGAT AAGGGACCTG CTACCTTAAA ATTAGATAAT AAAAATAAAA CTGCTACTAT CACCGTTAAA AAAGGTGTAA AGTGGTCAGA TGGCAAGCAA GTAACTGCTA AGGATATTGA ATATTCTTAT GAAATTATTG CAAATAAAGC AACAAAATCT TCTCGTTATA CTGAATCACT TCAAAATATT GTTGGTTTAA GTGAATATCA CGATGGAAAA TCTAACACTA TTTCGGGTAT TGAAATGCCA GATGGTGAAA ATGGTAGAAC TGTAGTACTT CACTTTAAGG AAATGAAACC TGGTATGAAG TTTAGTGGTA ATGGTTATTT CTGGGAAGCT GCAGCACCAT ACCATTACTT AAAGGATGTT CCATTTAATA AGTTACAATC CTCTGATCAA GTAAGAAAGA ACCCACTATT CTTTGGCCCA TATAAGATGA GTAAGGTGGT TCGTGGTCAA GCCGTAACCT TTGTACCTAA TAAGTATTAC TGGAGAGGTA CTCCAAAATT GGATAAGGTT ACTATTCAAG TTTTGAACCC TAACTCTGCT TCTCAAGCTA TTAAGAGTCA CAAGTATGAT ATTGCGGGTG TTGTTAACTC GCAATGGAAG AATGTGGCTA ATACCAATAA CGTTAACTGG ATTGCAAATA TTCCATTAGC TTACAGTTAC TTAGGCTTTA AAGTAGGTAA GTGGGATGGA GCTAAAGGCG AAAACGTAAT GAATAAGGAT GCTAAGATGA ACAATAAATC ATTACGTCAA GCTATTGCTT ATGGTATGAA TGTTTCTGCT GTAACGAAAC GTTATACTAA TGGCTTAACT TTCCATATTC CAACTTTAAT TCCAAAACAA TTTGGTAAAT ATTACGATAA GAATGTTAAA GGTTACGACT ACAATATCAA GAAAGGTAAT GAAATTCTTG ATAAAGCAGG CTACAAGAAG AAGGGTAAAT ATCGTGTACA ACCAAATGGC AAACCTTTAA CTATTCGTTT AGCCGCTATG ACTGGTAACT CTACCCAAGA GCCAATCATT CAAAACTACA TTCAACAATG GAAGAAGTTA GGCTTGAATG TTAAGTTAAC TGGTGGCCGT TTGATGGAAA TGAACTCCTT CTATAACAAG GTTCAAAATG ATTCTAAAGA CGTTGACATG TTCATGGGTG CATGGTCATT ATCTTCAGAA CCATCACCAA ATGACTTGTA CAGTGTAAAG GCTCCTTACA ACTTTACTCG TTTTGTAACT GCTAAGAATA CTAAGTTACT TCAGGAAATG GATTCTGAAA AGTCATTTAA CACAAACTAC CGTGTCAAGA AGTTCCATGA ATGGCAAAAG TACATGAATG ATGAAGCTTA TGTTGTTCCA GTATCTAACA GTTACAATGT AAATGCTGTT AACAGCAAGA TTACTGGTTA CTCATTGAAA CCTTCAGCTG CCAACAGTCT TTGGTACAAT GTTGGAATTG CAAAATAA
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Protein sequence | MSLMMILLNH QLVPNRWRNI TMKKAKLFGS LTLLSGVALT LAACGNNSNS KVDNPTKSFK EATPKKAVKK GGTVSVALET DTPITGIFLN ELSDTQTDSD AMAPGNEALF DTNDTYQIND KGPATLKLDN KNKTATITVK KGVKWSDGKQ VTAKDIEYSY EIIANKATKS SRYTESLQNI VGLSEYHDGK SNTISGIEMP DGENGRTVVL HFKEMKPGMK FSGNGYFWEA AAPYHYLKDV PFNKLQSSDQ VRKNPLFFGP YKMSKVVRGQ AVTFVPNKYY WRGTPKLDKV TIQVLNPNSA SQAIKSHKYD IAGVVNSQWK NVANTNNVNW IANIPLAYSY LGFKVGKWDG AKGENVMNKD AKMNNKSLRQ AIAYGMNVSA VTKRYTNGLT FHIPTLIPKQ FGKYYDKNVK GYDYNIKKGN EILDKAGYKK KGKYRVQPNG KPLTIRLAAM TGNSTQEPII QNYIQQWKKL GLNVKLTGGR LMEMNSFYNK VQNDSKDVDM FMGAWSLSSE PSPNDLYSVK APYNFTRFVT AKNTKLLQEM DSEKSFNTNY RVKKFHEWQK YMNDEAYVVP VSNSYNVNAV NSKITGYSLK PSAANSLWYN VGIAK
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