| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LGAS_0722 |
|---|
| Symbol | |
|---|
| ID | 4440075 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Lactobacillus gasseri ATCC 33323 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008530 |
|---|
| Strand | - |
|---|
| Start bp | 704942 |
|---|
| End bp | 706072 |
|---|
| Gene Length | 1131 bp |
|---|
| Protein Length | 376 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | 639672579 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_814551 |
|---|
| Protein GI | 116629379 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.00140499 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 57 |
|---|
| Fosmid unclonability p-value | 0.465581 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAT ATCAATTTTT ATCATTTAAA ACAGCTGATA TTGGCGACTA CCTTAAAGTC
TTTGCATGTA CTGCCGTCAT GTCGCAACCA ATTATGTCCT TAGTTATGGA CATCAGGCAA
CCAGCTCATA CTCAAGATAT TTTTGGTCTC CTATATAATC TAGTAAAATA TACTGCCCCT
GCTTTTATTT TTGGAATCTT ATATACAACT ACTAGAACCT ATGATTTAGA AAATCACTTT
TTATATAATA AATACCTTCG TAATAATTGG TCTAACTTAT TCGTACCGAC TATCTGGTGG
ACTTTAATTT ATTTACTAGG AATGCCCTGG GAACAGCAAG TAAACAAATA CTATAATTTT
CCAACTTTTT GCTGGCAATT CATTAACGGA AATGCTGCTC CTCATCTTTG GTATAACACG
ATGATGCTAC AATTTATCAT CCTAATGCCA CTCTTTTGGG CGATTAGTCG CTATGTGGGA
ACTAATATTA AACGTGGAAT CATAATTGCA ATCGTTACGT TTATCCTTTA TTTCACCTGG
CTTTGGTTTT ACGACACCTA TGTCTTTCAT GGCATCCATC AAAACGATTG GTATTTACTG
GATAGAGCTT TTATCTCTTT CTTTATCTAT GGCGTCTATG GTGTTTTGGC CTGGCAATTA
CGCGATTATG TTAACGCATT TTTTACTAAA TTTTGGTGGC TGCTTAGTAT TATTTTTATC
ATTTGTTTCA TTTGGACCAA TCTTGAACTA CAAAGTTTTG GCCACCCCAT TAATTTTAAT
AATGCTCCGT ATTATAAACC TTCCATGACA CTATACTCTT TAGCAGTTAT TGCTCTAATT
GCTGCATTTT GCTTGCATCA AGTAAAGAAA AATTCTCAAA CTAGTCTAAA AATTTTTCAT
TTTTTGGCTA TTTATGCCTA TCGTGCATAT CTTTCTAATG TATTCTGGAA CCAATTAGTT
TGGCGCGGCC TAAATATGTC ATTTCACGCT CACTATCATC CCTTTTTAAC TTTCTTTGGG
ACATGGATTT TTACTTGGTG TTTATCTTTT GCTTCTGCTT ATTTATTACA TCTTTGCTGG
ACTTGGTTTA AAGAAAATAA ATTGGTCAAA ATTAGTTTTC TGTTCAATTA A
|
|---|
| Protein sequence | MKKYQFLSFK TADIGDYLKV FACTAVMSQP IMSLVMDIRQ PAHTQDIFGL LYNLVKYTAP
AFIFGILYTT TRTYDLENHF LYNKYLRNNW SNLFVPTIWW TLIYLLGMPW EQQVNKYYNF
PTFCWQFING NAAPHLWYNT MMLQFIILMP LFWAISRYVG TNIKRGIIIA IVTFILYFTW
LWFYDTYVFH GIHQNDWYLL DRAFISFFIY GVYGVLAWQL RDYVNAFFTK FWWLLSIIFI
ICFIWTNLEL QSFGHPINFN NAPYYKPSMT LYSLAVIALI AAFCLHQVKK NSQTSLKIFH
FLAIYAYRAY LSNVFWNQLV WRGLNMSFHA HYHPFLTFFG TWIFTWCLSF ASAYLLHLCW
TWFKENKLVK ISFLFN
|
|---|
| |