| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LGAS_0634 |
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| Symbol | |
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| ID | 4440157 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactobacillus gasseri ATCC 33323 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008530 |
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| Strand | - |
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| Start bp | 640849 |
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| End bp | 641967 |
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| Gene Length | 1119 bp |
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| Protein Length | 372 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 639672491 |
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| Product | integrase |
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| Protein accession | YP_814466 |
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| Protein GI | 116629294 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00000314832 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 190 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTGTTT ATAAGGATAA TAAATCAAAA ACATGGTATA TCAAGCGTTC TTGGTACGAT
GTAAATGGCA AACGTCACTA TATTACCCGC CGAGGATTTA AAAATAAACG TGAAGCTGAA
AAAAAAGATA ATAAATTAGC AGTCCAAGTA AGCGATGGTG TTAACGTGAC AGAAAACCCG
ATTTTCGCCG ATTATTACGA TAATTGGGTA AAGACATACA AAGGTACTCC AAACGGTCAA
AGTAATTCTG TAGCACCTAA TACATTAACT GAATATATAT TGCAAGGTAA ACGGATTAGA
AACTACTTTG GAGCTACCAA AATCAAATCA ATAAAAAGAA CCACCTATCA GCAGTTTATA
AATGATTTTG GAAAAGACCA TGCTAAGACG ACCATGCGTA AACTTCATAA TATTATCAAA
GCTTGTATCC GTTCTGCGAT TAATGACGGC ATAATAACAA GAAACTTTAC TGACGATATT
TCACTAGCTT ATAACCAAGA TAAAGCCTAT AAGGTTACTT ATTTACAAGA CAAAGATATT
CCTAGACTAT ATAAATATCT TTACGACCAT AGGAAACCTC AGTATTCTTC CTCATATATG
CTAATGTTAA TGCTCCTAAC GGGCTTAAGA GAAAGCGAAG TTGCAGGATT AACATGGGAT
AATATTAACT TAAAAAGCAA TCTCATTACT GTAGAAAAAA GTTGGGTATA TACTCAAAAA
GATTATGGAC CAACAAAAAA CGGGTCATCT CAACGAATTG TGAGTGTCCC GTCTAAAATG
ATGGATTGTA TTCAAGAATT AAAAAATAAT CATAAAACCA AAGTTTTCTG GTCAAAGACG
CATAGATGCC TACCCGGATC TAAGGGCTTA ACAGAATGTC TTAGAACTGC ACTAAAAAAT
TTAGGTATTT CAGCCGATGA TTTCCACCCT CATTCTTTAC GACATTCTCA AGTTGCTCTT
TTGCTTCAAG CTGATATTTC TACTTATGAC ATTGCACAAC GCCTAGGACA TGCTACAACT
AAAACTACAG AAGAAACATA CGCCTATGAA TTTGAAAAGC ACAGAGAATT AGTTAATAAA
AAAATCAACG ATGTATTATC CAAAAAAATT GAAGATTAA
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| Protein sequence | MSVYKDNKSK TWYIKRSWYD VNGKRHYITR RGFKNKREAE KKDNKLAVQV SDGVNVTENP
IFADYYDNWV KTYKGTPNGQ SNSVAPNTLT EYILQGKRIR NYFGATKIKS IKRTTYQQFI
NDFGKDHAKT TMRKLHNIIK ACIRSAINDG IITRNFTDDI SLAYNQDKAY KVTYLQDKDI
PRLYKYLYDH RKPQYSSSYM LMLMLLTGLR ESEVAGLTWD NINLKSNLIT VEKSWVYTQK
DYGPTKNGSS QRIVSVPSKM MDCIQELKNN HKTKVFWSKT HRCLPGSKGL TECLRTALKN
LGISADDFHP HSLRHSQVAL LLQADISTYD IAQRLGHATT KTTEETYAYE FEKHRELVNK
KINDVLSKKI ED
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