Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LGAS_0553 |
Symbol | |
ID | 4440228 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus gasseri ATCC 33323 |
Kingdom | Bacteria |
Replicon accession | NC_008530 |
Strand | + |
Start bp | 582071 |
End bp | 583609 |
Gene Length | 1539 bp |
Protein Length | 512 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 639672410 |
Product | C4-dicarboxylate anaerobic carrier dcuC |
Protein accession | YP_814388 |
Protein GI | 116629216 |
COG category | [S] Function unknown |
COG ID | [COG1288] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 7.693670000000001e-19 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGTAATA CAGTTCAAAA AAAGAAAAAG CATCAATTTC CAACAGCGTA TACGGTTATT ATTATCGTTC TGTTATTGGT GCAGATTTTA ACATTTTTTA TCCCATCAGG TAATTATGCA ACGCTTGAGT ATGATCAACC TAATAAGGAA TTTGTGATTA CTAAGCCAAA TGGTAGTAAG CATAAAGAGG CAGCAACTCA AAAAACTTTA GATAAGTATA AAGTTAAGAT TGATGTGAAG AAGTTTACTA ATGGTACTAT TTATAAGCCA GTGGCAATTC CTGATTCTTA TGAAAAGATT GATCAGAAAA AGCCAGGATT AGGTGGAGCA ATTTATCAAT TTTTATCTTC ACAAGTAAAC GGAATTGCGC AAAGTATTGA TATTATTGCC TTTGTTTTAA TTCTGGGTGG ATGTATTGGC GTTGTGCACG CAAATGGTGC TATTGATGCC GGTATGCAGG CACTTTCTAA AAAGATCAAG GGTAAGCAAG TATTACTAAT CGTTTTGGTA ATGGGCTTGA TTGCCATTGG TGGTACAACC TTTGGTTTAG CTGAAGAGAC CATGGCTTTT TATCCAATTT TGATTCCCGT ATTCTTACTG GCTGGCTTTG ATCGTATGAC GGTTGTCGCG ACGATCTTCT TAGGAACCAG TATTGGTACG ATGGCGTCGA CGATTAACCC ATTTTCAACT GTAATTGCTT CTAACACTGC TGGTGTTAAC TTCACAGAGG CATTGCCGTT AAGAATTTGT ATGTGGGCAA CTTGCGTTAT TGTGGGGATG ATTTATGTTA TCGCTTATGC CAAAAAGGTA CAAAAGAACC CCAAGGCCTC ATATGTTTAT AATGACTTCG TTAAAGAAGA TCAAGAATAT CTGAATCAAG ACCAAACAAC GCAAGAACAA GAATTTACTT GGCGTCAAAA ATTAACATTG CTTGTTTTCG CAATTGCATT TATCGTAATG ATTTGGGGTG TTCAGCAAAA GGGCTGGTAC TTTACTGAAA TTGCGGTTGT CTTCTTGGCA ACTGGATATA TTTTTGCCTT TATTTCAGGC TTGAGCGAGC ACAAGTTTGT TGAAAGCTTT GTAAATGGCG CAGGCGACTT ATTAGGTGTG GCTTTAACAA TTGGATTAGC GCGTGCCGTT TCAATTGTAA TGGAAGAAAG TCATACTAGC GATACCATCA TGAACTTCTT TAGCCAACAA GTCTCTGGTA TGCCACCACT AGTGTTCATT TGGTTTATGT TCTTGGTCTA CATTGTTTTA GGCTTCTTTA TTCAATCATC TTCTGGTTTA GCCGTTCTCT CAATGCCAAT TATGGCGCCA TTAGCCAACG TAGTTGGTAT TGACCGAGCA AGCATTATTG ATGCTTATAA CTGGGGACAG GGCTTTATCA GTTTGGTAGC TCCAACTGGT TTGATTTTAA TGAGCTTAAT GATGGTGAAT ATCGGCTTTA ACAAATGGTT TAAGTTTTGC TGGAAATTAT TAGTAATTGA GTTTGGTATT TGTTTAGCAT TTTTAGCAAT TGGTCTGGTT GTTTACTGA
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Protein sequence | MSNTVQKKKK HQFPTAYTVI IIVLLLVQIL TFFIPSGNYA TLEYDQPNKE FVITKPNGSK HKEAATQKTL DKYKVKIDVK KFTNGTIYKP VAIPDSYEKI DQKKPGLGGA IYQFLSSQVN GIAQSIDIIA FVLILGGCIG VVHANGAIDA GMQALSKKIK GKQVLLIVLV MGLIAIGGTT FGLAEETMAF YPILIPVFLL AGFDRMTVVA TIFLGTSIGT MASTINPFST VIASNTAGVN FTEALPLRIC MWATCVIVGM IYVIAYAKKV QKNPKASYVY NDFVKEDQEY LNQDQTTQEQ EFTWRQKLTL LVFAIAFIVM IWGVQQKGWY FTEIAVVFLA TGYIFAFISG LSEHKFVESF VNGAGDLLGV ALTIGLARAV SIVMEESHTS DTIMNFFSQQ VSGMPPLVFI WFMFLVYIVL GFFIQSSSGL AVLSMPIMAP LANVVGIDRA SIIDAYNWGQ GFISLVAPTG LILMSLMMVN IGFNKWFKFC WKLLVIEFGI CLAFLAIGLV VY
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