Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LGAS_0537 |
Symbol | |
ID | 4440247 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus gasseri ATCC 33323 |
Kingdom | Bacteria |
Replicon accession | NC_008530 |
Strand | - |
Start bp | 567131 |
End bp | 567859 |
Gene Length | 729 bp |
Protein Length | 242 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 639672394 |
Product | uridine kinase |
Protein accession | YP_814372 |
Protein GI | 116629200 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0572] Uridine kinase |
TIGRFAM ID | [TIGR00235] uridine kinase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.0563702 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.00000000000000916272 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | TTGTCAATAT TATTGCCTGT AAATCTATCA CAGAGCGTAA TTTTAAGGTA TTATTGTAAT AGTTTAAAAA AGGAGATTTT AATTGTGCAA AGTAAACGCC CTATTATCAT TGGAATTGCC GGTGGTTCAG GTAGTGGGAA GACAACCATT GCCCATGAAA TTTATGACCA ATTACAACAA GATGACCATA TTTTAATTAT GACGCAAGAT TCTTATTACA AGAATAACGA TGACTTATCA ATGTCAGAGC GTAAAAAGAT TAACTACGAT CATCCAGATG CCTTTGACAT GCCACTACTT GTTGAGCAAC TTCGTCAATT AATGGACTAT AAGGCAGTTG AAATGCCAGT TTACGACTTT ACTGCTCATA CTAGAAGTGA AAAGACTATT CACACTGAAC CAGCTGATAT TATTATCCTA GAAGGTATTC TCGTTCTTGG TGAAGAAAAC TTACGTAATT TAATGAGCAT CAAGGTCTTT GTTGATACGG ATGACGATAT TCGTTTTATC AGAAGATTAG AACGTGACAC GCAAGAACGT GGTCGTTCAG TTCATTCAGT TCATTCAGTT ATTGATCAAT ACTTAAAGAC CGTTAAGCCA ATGTACAACC AATTTATTGA ACCAACTAAG CGTTATGCGG ACATCATCGT TCCAGAAGGT GGAGAAAATG ATGTTGCTAT TGATATGCTT ACAACTAAGA TTCGTTCTGT TTTGAGCAAC GTCAAGTAA
|
Protein sequence | MSILLPVNLS QSVILRYYCN SLKKEILIVQ SKRPIIIGIA GGSGSGKTTI AHEIYDQLQQ DDHILIMTQD SYYKNNDDLS MSERKKINYD HPDAFDMPLL VEQLRQLMDY KAVEMPVYDF TAHTRSEKTI HTEPADIIIL EGILVLGEEN LRNLMSIKVF VDTDDDIRFI RRLERDTQER GRSVHSVHSV IDQYLKTVKP MYNQFIEPTK RYADIIVPEG GENDVAIDML TTKIRSVLSN VK
|
| |