| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LGAS_0534 |
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| Symbol | |
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| ID | 4440244 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactobacillus gasseri ATCC 33323 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008530 |
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| Strand | - |
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| Start bp | 563307 |
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| End bp | 564209 |
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| Gene Length | 903 bp |
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| Protein Length | 300 aa |
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| Translation table | 11 |
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| GC content | 32% |
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| IMG OID | 639672391 |
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| Product | transcriptional regulator |
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| Protein accession | YP_814369 |
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| Protein GI | 116629197 |
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| COG category | [K] Transcription |
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| COG ID | [COG2188] Transcriptional regulators |
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| TIGRFAM ID | [TIGR02404] trehalose operon repressor, B. subtilis-type |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.207932 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.0000000000234574 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | TTGAAAGTAT CCGCTTTCAT TAATCTTGAC TTAAATACTA TACTTGTCTG TACAAGTTGT
CAATACTATT TTATGAAAAA GCTTACTTTT CTTTTAAATA AGCATTTTGT AGATAATAAA
GTTTTTCTTT ACTTGTCTAA ACAAGTGTAT ATAATTAAAG ACAAAGGAGG ATTTTTTATG
GCTCAATCCA AAGTTAGTGC TATTGCTCAA GACTTAGTAG ATAAAATTAA GCATCAACAA
TATAAACCTG GCGAATATCT CCCTAGTGAA CATCAATTAA TGGACTTATA TGGGGCTTCA
AGAGAAACAA TTCGCAAAGC ACTTACTAGC TTAACTGACT TAGGCTTAAT TCAAAAAATT
CGCGGAAAAG GCTCAATAGT TTTAAATCTT GATCGCTACG CTTTTCCTAT TTCAGGAATT
AGCAGTTTCG CTGAATTGAA CAATCAATTA GGACTTAAGG CGGAAACAAA AGTTTTACTT
TTACAAAAAG AAGAACATTT ACCTACTGGC TTTATCAAAT ATTTTCCTGA AGAAAAAAAC
AGTGCCGGTT TTCATCTTGA ACGCTTGCGA TTAATAGAAG GACAAGCTGA TGTCTTAGAT
TGCGACTATT TGCTTTCACC TCCTATTAAT TCACTTCCAA AAGATGCTGC AAAAACTTCT
ATTTATAATT ATTTAGAAAA TAAAGAAAAA TTAGAAATTT CCTATGCAAC GAAAGAAATT
TCTGTCTGCA CAGTTAACCA AAGAATTCGA GATTTACTTC AACTAGATAA CGAACTCGCA
GTGCTGGTCG CAAGCAGAAA TTATTTAGCT GATACAACTA AATTTGAACT AACTCTGTCA
TATCATCGAC CTGATAAATT CAAGTTTGTT GATTTTGCTC GAAGAAAAAA GATTAAATTT
TAG
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| Protein sequence | MKVSAFINLD LNTILVCTSC QYYFMKKLTF LLNKHFVDNK VFLYLSKQVY IIKDKGGFFM
AQSKVSAIAQ DLVDKIKHQQ YKPGEYLPSE HQLMDLYGAS RETIRKALTS LTDLGLIQKI
RGKGSIVLNL DRYAFPISGI SSFAELNNQL GLKAETKVLL LQKEEHLPTG FIKYFPEEKN
SAGFHLERLR LIEGQADVLD CDYLLSPPIN SLPKDAAKTS IYNYLENKEK LEISYATKEI
SVCTVNQRIR DLLQLDNELA VLVASRNYLA DTTKFELTLS YHRPDKFKFV DFARRKKIKF
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