| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LGAS_0529 |
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| Symbol | |
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| ID | 4440274 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactobacillus gasseri ATCC 33323 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008530 |
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| Strand | + |
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| Start bp | 558524 |
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| End bp | 559357 |
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| Gene Length | 834 bp |
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| Protein Length | 277 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 639672386 |
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| Product | amino acid ABC transporter periplasmic protein |
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| Protein accession | YP_814364 |
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| Protein GI | 116629192 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.488243 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 0.00197621 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGGCTAAAA TGAAAAAATC AATTAAGATT TTTATTTTAC CTTTGGTATT AGTTTTACTG
ATTACTTTAA CCGGATGTGC CAAAAAGCAA AAATCAAGTA ATATTTATGA ACAGGTTAAA
GAAAGTAAAA CCATTACTTG GGGCGTTAAG GCTGATACGC GATTATTTGG TTTAATGAGT
ATTAAAACTG GAAAAATCGA AGGCTTTGAA GTGGATTTAG CAAAAGCCTT AACTAAACAA
ATGTTAGGTA AAAATGCAAA AACTGAATTT GTGCAAACTA CGCCTAAGAC GAGAATTCCG
CTACTTAAGA ATGGTAACAT TGATGCAATT TTAGCAACAA TGACGATTAC ACCTGATCGT
AAAAAACAAG TAACTTTTAG TGAACCATAC TTTACTGCAG GTCAATCTTT ACTAGTTAAA
GATAATTCAA CTATTAAGAA TGTTAAGGAT CTTAATGGTA AAACTGCTTT AGCGGTAAAG
GGAACAACAG CAGTTGATAA TGTTAAAAAA TTTGCACCTA AAGCAAAAGT TTTAGAGTAT
GACGATTATG GTCAAGCTTT TACTGCCTTA AAAGCGGGAC AAGGTCAAGC AATGACTACT
GATAACGGTT TACTTGCCGG AATTGCGAGT GAAAATAAAG GCTATAAATT AGTTGGTGGT
ACCTACACCA GTGAGCCTTA CGGGATTGCT GTAGAAAAAG GACAAACCGA TTTTGCTGAC
CGTATTAATA AGGCACTAAA TGAATTAAAG AAAAACGGAA CATATCATCG TTTGTTAGTT
AAATGGTTCA ATGGTATTCC AGGATTTAAC ATTAAGGAGG TTGAAAATTC GTGA
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| Protein sequence | MAKMKKSIKI FILPLVLVLL ITLTGCAKKQ KSSNIYEQVK ESKTITWGVK ADTRLFGLMS
IKTGKIEGFE VDLAKALTKQ MLGKNAKTEF VQTTPKTRIP LLKNGNIDAI LATMTITPDR
KKQVTFSEPY FTAGQSLLVK DNSTIKNVKD LNGKTALAVK GTTAVDNVKK FAPKAKVLEY
DDYGQAFTAL KAGQGQAMTT DNGLLAGIAS ENKGYKLVGG TYTSEPYGIA VEKGQTDFAD
RINKALNELK KNGTYHRLLV KWFNGIPGFN IKEVENS
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