| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LGAS_0523 |
|---|
| Symbol | |
|---|
| ID | 4440268 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Lactobacillus gasseri ATCC 33323 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008530 |
|---|
| Strand | + |
|---|
| Start bp | 551516 |
|---|
| End bp | 552436 |
|---|
| Gene Length | 921 bp |
|---|
| Protein Length | 306 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | 639672380 |
|---|
| Product | alpha/beta hydrolase superfamily protein |
|---|
| Protein accession | YP_814358 |
|---|
| Protein GI | 116629186 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4814] Uncharacterized protein with an alpha/beta hydrolase fold |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.245635 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 67 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGAATAA ATATTTTTCA ATTAATAATT GTCCTTGTAT ACTGGAGAAA AAGTGTGAGA
GGAAAAATTA TGAAGAAGAG AAAAATTTAT CTTACTAGTT TTTTTATTGC TTTATTTTTA
TTATTTTTAG CGGGATGCAG TCAAAAGTCG CAAGAAGTTC CCGACAAAAA GGTTACTGTG
TCATTGAATA ACACTAAAAC AATTCCGACT TTTTTCTTCC ACGGCTGGGG ATCCAGCGTA
AATGCTGAAA AGCATATGGC AAATGCAGCT AAAGAGGCTG GCGCGGCTAA TACAATTGTT
CAAGCTGATG TAAGTAAAAA TGGTACTGTT AAGTTGAATG GAACTATTCC TAAAAATGCT
AAGAGCCCAA TTATTGAGGT TAATTTGGAA GACAATCAAA GTGGCAAGAC ATCATACGTG
AAAGATGTGA TTACTGCCGT TTCAAATAAA TATCATTATG CAAAAATCAA CCTAGTTGGA
CATTCGATGG GAAACTTGCA GATTGCTAAT TATATTAATG AAAACTACAA CAATAAAAAA
TTGCCACAGA TCAATAAAGT AGTTTCAATT GCTGGTCATT ACAATGGCTA TTTAGGCGAA
GAAGCTGGAC AAAAAGCTAA GATCAAGAAT AAAGAAACTG GGCAACCTGA TATTTATAGT
GACGGATTTA AGCAATTATT ACCGTTGCGT ATGCACTATC CAAGGCAGAT CGAAGTTTTA
AATATTTATG GTAATAAGGA AGATGGTTCG AAGTCAGATG GGTCGGTTTC TGTAGCTTCT
GCTCAAAGTT ATAAATATTT AATTAATGGA CGAGCAAAAT CATATCACGA GGTTGAAATT
AAAGGAAAAA ATGCACAGCA TAGTAAATTG CATGAAAATG AAGAAGTTGA TCATCTTCTA
ATTGACTTTT TATGGAAATA A
|
|---|
| Protein sequence | MRINIFQLII VLVYWRKSVR GKIMKKRKIY LTSFFIALFL LFLAGCSQKS QEVPDKKVTV
SLNNTKTIPT FFFHGWGSSV NAEKHMANAA KEAGAANTIV QADVSKNGTV KLNGTIPKNA
KSPIIEVNLE DNQSGKTSYV KDVITAVSNK YHYAKINLVG HSMGNLQIAN YINENYNNKK
LPQINKVVSI AGHYNGYLGE EAGQKAKIKN KETGQPDIYS DGFKQLLPLR MHYPRQIEVL
NIYGNKEDGS KSDGSVSVAS AQSYKYLING RAKSYHEVEI KGKNAQHSKL HENEEVDHLL
IDFLWK
|
|---|
| |