Gene LGAS_0504 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLGAS_0504 
Symbol 
ID4440400 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus gasseri ATCC 33323 
KingdomBacteria 
Replicon accessionNC_008530 
Strand
Start bp529952 
End bp530836 
Gene Length885 bp 
Protein Length294 aa 
Translation table11 
GC content34% 
IMG OID639672362 
Productmalolactic fermentation system transcription activator 
Protein accessionYP_814340 
Protein GI116629168 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones66 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones97 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGACA AGGATTTACT ATATTTTTGC AAATTAGTTG AAACACAGAA CTATACCCTA 
ACTGCTAATT CATTTAACGT TACACAACCG ACAATTTCGA TGGCGATCAA GCGACTTCAA
AATAGATTTG ATGATCCCCT GATTTTTCAA AAGAATCGCA AAAGTAAAAT TACACTCTCA
CCCGCAGGTG AATTACTTTA TCAAAAAGCA AAATATCTTT TAAAAGAAAT GGCAAGTATC
GATTACGACG TTAAACACGC CAATATTAAA AAAATTAGAG TAGCCTTTTC TGGAATTGCT
GGTAGTATTT ATATTCCTGA AATTATAGAA AAATTTTATA AAGAAGACAT TGTTAACCTG
TTAGATGCTC GCTTAGAAAG AAGTGCGACT GCATTTAAAG ATTTAAACAA TGGCGATGTA
GACGTTGCTA TCTATTCTTG GATGGTGCCA ATCAATGATC CTGCCTATTT TATCCGTAAT
TTAGATAGAA CAGAGTTAGT TATCATTACT GGTAAAGATG ATCCTTGGAA AAATAAAAAA
GTTATTGATG CCCAAGAATT AAGAAACCGC AAGTTTGTGG CCAGACAAAA GGGTTACTTA
ACTAGAGAAT GTTTGGAAGA AGAGGCAAAG CTCGGCGATT TTACTCCAAA CATTTTATAC
ACGGCTCGAA CAATGAAACT AATGATCGAT TTAGTTAAAA GAAATGTTGG TATTGCTCTA
GCAATGGAGA ATTCCGTTAA GGATGAAAAA GATCTCCACA TAATTCGTCT ACGTTCAGGA
CAAAAACTCT GGGCATACAT GCAAATTGCA ATGAGAAAAA GTTTTATTCC CAATAAATAT
CAAAGACAAG GAATTGATAT TCTTCGAAGG TTCCATCTAA ATTAA
 
Protein sequence
MNDKDLLYFC KLVETQNYTL TANSFNVTQP TISMAIKRLQ NRFDDPLIFQ KNRKSKITLS 
PAGELLYQKA KYLLKEMASI DYDVKHANIK KIRVAFSGIA GSIYIPEIIE KFYKEDIVNL
LDARLERSAT AFKDLNNGDV DVAIYSWMVP INDPAYFIRN LDRTELVIIT GKDDPWKNKK
VIDAQELRNR KFVARQKGYL TRECLEEEAK LGDFTPNILY TARTMKLMID LVKRNVGIAL
AMENSVKDEK DLHIIRLRSG QKLWAYMQIA MRKSFIPNKY QRQGIDILRR FHLN