Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LGAS_0504 |
Symbol | |
ID | 4440400 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus gasseri ATCC 33323 |
Kingdom | Bacteria |
Replicon accession | NC_008530 |
Strand | - |
Start bp | 529952 |
End bp | 530836 |
Gene Length | 885 bp |
Protein Length | 294 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 639672362 |
Product | malolactic fermentation system transcription activator |
Protein accession | YP_814340 |
Protein GI | 116629168 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 66 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 97 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATGACA AGGATTTACT ATATTTTTGC AAATTAGTTG AAACACAGAA CTATACCCTA ACTGCTAATT CATTTAACGT TACACAACCG ACAATTTCGA TGGCGATCAA GCGACTTCAA AATAGATTTG ATGATCCCCT GATTTTTCAA AAGAATCGCA AAAGTAAAAT TACACTCTCA CCCGCAGGTG AATTACTTTA TCAAAAAGCA AAATATCTTT TAAAAGAAAT GGCAAGTATC GATTACGACG TTAAACACGC CAATATTAAA AAAATTAGAG TAGCCTTTTC TGGAATTGCT GGTAGTATTT ATATTCCTGA AATTATAGAA AAATTTTATA AAGAAGACAT TGTTAACCTG TTAGATGCTC GCTTAGAAAG AAGTGCGACT GCATTTAAAG ATTTAAACAA TGGCGATGTA GACGTTGCTA TCTATTCTTG GATGGTGCCA ATCAATGATC CTGCCTATTT TATCCGTAAT TTAGATAGAA CAGAGTTAGT TATCATTACT GGTAAAGATG ATCCTTGGAA AAATAAAAAA GTTATTGATG CCCAAGAATT AAGAAACCGC AAGTTTGTGG CCAGACAAAA GGGTTACTTA ACTAGAGAAT GTTTGGAAGA AGAGGCAAAG CTCGGCGATT TTACTCCAAA CATTTTATAC ACGGCTCGAA CAATGAAACT AATGATCGAT TTAGTTAAAA GAAATGTTGG TATTGCTCTA GCAATGGAGA ATTCCGTTAA GGATGAAAAA GATCTCCACA TAATTCGTCT ACGTTCAGGA CAAAAACTCT GGGCATACAT GCAAATTGCA ATGAGAAAAA GTTTTATTCC CAATAAATAT CAAAGACAAG GAATTGATAT TCTTCGAAGG TTCCATCTAA ATTAA
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Protein sequence | MNDKDLLYFC KLVETQNYTL TANSFNVTQP TISMAIKRLQ NRFDDPLIFQ KNRKSKITLS PAGELLYQKA KYLLKEMASI DYDVKHANIK KIRVAFSGIA GSIYIPEIIE KFYKEDIVNL LDARLERSAT AFKDLNNGDV DVAIYSWMVP INDPAYFIRN LDRTELVIIT GKDDPWKNKK VIDAQELRNR KFVARQKGYL TRECLEEEAK LGDFTPNILY TARTMKLMID LVKRNVGIAL AMENSVKDEK DLHIIRLRSG QKLWAYMQIA MRKSFIPNKY QRQGIDILRR FHLN
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