Gene LGAS_0502 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLGAS_0502 
Symbol 
ID4440398 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus gasseri ATCC 33323 
KingdomBacteria 
Replicon accessionNC_008530 
Strand
Start bp527266 
End bp528693 
Gene Length1428 bp 
Protein Length475 aa 
Translation table11 
GC content38% 
IMG OID639672360 
Product6-phospho-beta-galactosidase 
Protein accessionYP_814338 
Protein GI116629166 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2723] Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase 
TIGRFAM ID[TIGR01233] 6-phospho-beta-galactosidase 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones97 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGAAT TTAAATTTCC AAAAGGATTT TACTTTGGCG GGGCAACTGC TGCTTACCAA 
TGTGAAGGCG CAACAAAAGA AGATGGTAAA GGTGAAGTAA TCTGGGATAA GTACTTGCGT
GAGCAAGGAA CAATTAATCC AGATCCAGCT TGTGATTTCT ACCACCGTTA TCCAGAAGAT
TTAGAATTAT GTAAAGAATT CCATATTAAT GCAATTAGAG TTTCAATTGA CTGGGCAAGA
ATTTTTCCAG AAGGTGAAGG GAGAATTGAG CCAAGAGGTG TTGAATATTA CCACAAGTTA
TTTAAGAAAT GTCATGAAGA AGGCGTAGAA CCCTTTGTAA CGCTTCATCA CTTTGATACG
CCACAAGCCT TGCAAGACAA GGGCGGCTGG CTTTCACAAG AAATGTTAGA CGCTTTTGTT
GAATATGCTA AATTCTGCTT TAAGGAGTAT GCTGGTGAAG TTAGATACTG GATTACGATT
AATGAACCAA CATCAATGGC TGGTCAACAA TATGTTGGTG GAACATTCCC TCCTGCGTAC
AAGGATCAAT TTGATAAGTG TTTTAAAGCT GAATATAACC AAAATCTAGT TCATGCCCGG
ATTGTTAATG CTTATAAAGA AGCAGGCTAT ACTGGCCAAA TTGGTATTGT TCATGCTCTT
CAAACTGTTT ATCCAGCAAC TGACAGTGAA GGCGATAAGC ATGCCGCTGA ATTGAAAGAT
GTATTAGAAA ATAAGTTTTA TCTTGATGGA ACATTAGCAG GTAAGTATTC AAAGCATACT
CTTGCTTTAG TAAAAGAAAT CATTGATGCT AATGGTCAAC AAATGATTGA CATCAAGCCG
GAAGACGAAA AAGTACTTCT TAAAGCTGCA AAACAATTAG ACTTTGTTGG AGTTAACTAT
TACTTCTCGA AGTTTATGAA AGAATATCAT GGCGACACCG AAATCATTCA TAACGGTACT
GGTGAAAAGG GAACTGATGT CAACCGTATG AAAGGCGTGG GTGAAGAAAT TCACCCCAAG
GACTTGCCAG CAACTGATTG GGATTGGATC ATTTATCCAC AAGGGATGTA TGATCAATTG
AAGCGTGTTT ACGATGATTA TCCTCTAGTT CATTCAATCT ATATTACCGA AAACGGAATG
GGTTATAAGG ATAAGTTTGA AGGCGAAGAT AAGATCATCG ATGATACACC AAGAATTGAT
TATCTAAAGC AACATATGGA AGAAGTAGCT AAGGCAATTG AAGCTGGTAT TCCAGTTAAT
GGTTACTTTG TATGGTCACT GCAAGATATG TTCTCTTGGA CGAATGGTTA TTCAAAGCGT
TATGGTTTAT TCTATGTCGA CTTCAAGACG CAGAAGCGTT ACGCTAAGAA GAGCGCATAT
TGGTATAAGA AACTAGCTGA AACTCGAGAA ATTCCTCCTG TTGATTAA
 
Protein sequence
MKEFKFPKGF YFGGATAAYQ CEGATKEDGK GEVIWDKYLR EQGTINPDPA CDFYHRYPED 
LELCKEFHIN AIRVSIDWAR IFPEGEGRIE PRGVEYYHKL FKKCHEEGVE PFVTLHHFDT
PQALQDKGGW LSQEMLDAFV EYAKFCFKEY AGEVRYWITI NEPTSMAGQQ YVGGTFPPAY
KDQFDKCFKA EYNQNLVHAR IVNAYKEAGY TGQIGIVHAL QTVYPATDSE GDKHAAELKD
VLENKFYLDG TLAGKYSKHT LALVKEIIDA NGQQMIDIKP EDEKVLLKAA KQLDFVGVNY
YFSKFMKEYH GDTEIIHNGT GEKGTDVNRM KGVGEEIHPK DLPATDWDWI IYPQGMYDQL
KRVYDDYPLV HSIYITENGM GYKDKFEGED KIIDDTPRID YLKQHMEEVA KAIEAGIPVN
GYFVWSLQDM FSWTNGYSKR YGLFYVDFKT QKRYAKKSAY WYKKLAETRE IPPVD