| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LGAS_0463 |
|---|
| Symbol | |
|---|
| ID | 4440359 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Lactobacillus gasseri ATCC 33323 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008530 |
|---|
| Strand | + |
|---|
| Start bp | 492996 |
|---|
| End bp | 493856 |
|---|
| Gene Length | 861 bp |
|---|
| Protein Length | 286 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 639672321 |
|---|
| Product | sugar kinase |
|---|
| Protein accession | YP_814299 |
|---|
| Protein GI | 116629127 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0063] Predicted sugar kinase |
|---|
| TIGRFAM ID | [TIGR00196] yjeF C-terminal region, hydroxyethylthiazole kinase-related |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 46 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 61 |
|---|
| Fosmid unclonability p-value | 0.787563 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGGATAAGA TTAAAATGAA AAGTATTTCA AAAGAACTAA TATCTGAAGT AATTAAAAAG
CGAAAAAGTG CTACACATAA GGGAAACTAT GGGCGAGTAC TATTAATTGG CGGAAGTAAA
AAATATGGTG GTGCGCTCAT TATGTCTGCA GAAGGAGCGC TAAACAGTGG TGCTGGCTTG
ACTACTGTGG CGACAGATTC AGTAAATATT AGCGCTTTAC ATACACGAGA TCCTGAAATT
ATGGCTCTTG ATTGGAAAAA AAGAGATGAG TTAAAAAATC TAATTGTGAG TTCTGATGTA
GTAGTTTGCG GAATGGGACT TGGTTTAGAT GATCAGGCAC GCGATATTTT AGCTCTTATT
AGAGATAGCA TTACCTTAAA GCAAACATTA ATTTTAGATG CAAGTGCACT TGATTTAATT
AGTCAGCAAA AAGACATATT GCCAGTAAAC TCAAAATTAG TAATTTTTAC ACCTCATCAG
ATGGAATGGC AAAGATTAAG TAAAATAAAA ATTGCTGATC AGACTGATCA ATTGAATCAA
GCTTTTTTAA ATGAGTTAGT TCCCAGGAAA AATGCAATTT TAGTATTAAA ATCTAACCAT
ACTAAAGTTT ACGATCAAGC AGGAAATATC TATCAGAATC CTTTTGGTAA TCCCGGAATG
GCGATTGACG GAATGGGAGA TACTTTAGCT GGAATTATTG GTGGTTTCTG CGGACAATTT
ACACCTAATT TAGCAACTGT CGCAGGTGCT GTGGGTCTCC ATTCAATAAC TGCTGATGAA
ATTGCAGTGA AACAATATAT TGTTCGACCG ACACAGCTGT CAGCACTTAT TCCCGCAATG
ATGAGAAAAT ATGAGAAGTG A
|
|---|
| Protein sequence | MDKIKMKSIS KELISEVIKK RKSATHKGNY GRVLLIGGSK KYGGALIMSA EGALNSGAGL
TTVATDSVNI SALHTRDPEI MALDWKKRDE LKNLIVSSDV VVCGMGLGLD DQARDILALI
RDSITLKQTL ILDASALDLI SQQKDILPVN SKLVIFTPHQ MEWQRLSKIK IADQTDQLNQ
AFLNELVPRK NAILVLKSNH TKVYDQAGNI YQNPFGNPGM AIDGMGDTLA GIIGGFCGQF
TPNLATVAGA VGLHSITADE IAVKQYIVRP TQLSALIPAM MRKYEK
|
|---|
| |