| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LGAS_0457 |
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| Symbol | |
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| ID | 4440353 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactobacillus gasseri ATCC 33323 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008530 |
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| Strand | + |
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| Start bp | 484270 |
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| End bp | 485733 |
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| Gene Length | 1464 bp |
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| Protein Length | 487 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 639672315 |
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| Product | major facilitator superfamily permease |
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| Protein accession | YP_814293 |
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| Protein GI | 116629121 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily
[TIGR00880] Multidrug resistance protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000000209922 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 52 |
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| Fosmid unclonability p-value | 0.207287 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGAGCATGC AAAATAAGAG TAATACTAAA ATTGTCACGA TTGCCATCTT TTTGACGACC
TTTATGACTG CAATTGAAGG TACTATTGTT TCAACGGCCA TGCCAACTAT TGTTTCTGAT
CTGAATGGAT TAGAAATCAT GAATTGGGTA GTTTCCATCT TTTTATTGAT GACTGCTGTT
TCAACACCAA TTTATGGAAA ATTAGCTGAT AGTATCGGCA GGAAACCTGT TTTTCTATTT
GGAATTGCAG TTTTCGTAGT TGGTTCTGCG CTCTGCGGAA TTGCTCAAAA TATGGTAGAA
CTAATCCTCT TTCGTGTGAT TCAGGGATTG GGTTCAGGTG CTGTTCAGCC AGTGGCAGTT
ACAATCATCG CTGATTTATA TACGCTTGAA AAAAGAGCCA AGATGTTAGG ATTGAACTCA
GGCTTTTGGG GAGTAGCTTC TGTTATTGCT CCCTTACTAG GTGGATTTAT TGTACAGCAT
CTTTCATGGC ATTGGATTTT TTATATTAAT GTGCCATTAG GAATCATAGC CTTTCTTTTG
GTCATCTTCT TCTTAAAAGA AAAGAAAACC AGCAGTAATT CTACGTTAGA CTTAAAAGGA
ACAACTTGCT TGGTTATCTT TTTGTTGGCT TTAATGATAT TTTTACAAGA GTTAGAAGAT
GGCTTAAATT TAGTCTTACT AGGCTTAGTC GCTATCATTA TTATTTCAGC TATTATCTTT
TTCAAAACTG AGAAAAGGGC AAAAGATCCA ATTATGCCAT TAGATATGTT GAGTAGTAAA
GAATTTACAA TGATTAACTT GATTACACTA CTTATTTCTG GCGTAGTAAT TGGTTTTGAA
TTTTACATTC CGACCTGGAT GCAAGGGATA AATGCTACAA GTGCGTCTGT TGCTGGCTTT
GCAGTAACAC CAAGTTCTTT AATGTGGATC GTAGGCTCAT TTTTAATTGG TGGTATGTTA
GGTCGATGGG GGATAAAGAA AACATATGAT TATATGTTGC TTATCTTGAT AATTGCCGAT
TTAGCATTAA TTTTAGTTCC AATTTACACA TCGTTTTGGG TATTTTGTCT AATTGCGGCC
TTTAACGGAA CAGCTTTTGG GGCTATTACT ACAGCTTCAC AAGTTCGCTC TCAAGTACTG
GTTGGACGCG ATAAGATTGG TGTTGCGACT AGTTTTAATA CACTAATGAA ATATTTAGGA
CAGACGATGA TGGTATCGAT CTATGGTATT ACTTTTAATA TGGTCGTAGC CAAACATTTA
GCGCATTATC CAAATTTAAC GCAAAAGATG ATGAATGATA TTGTTTCTGC TGATAAGGCT
AAACATTTAG CAGCTAATTT AATACCTGGT TTAAGACAAG TATTATTGAG CGGGTTAAAG
TCTGTATATG TAGTTTCTCT AATTGTTATT GTTTTATCTT TGATTCTTAA TCAACTCTAT
AGGCAAAAGA AAATTGCCAA ATAA
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| Protein sequence | MSMQNKSNTK IVTIAIFLTT FMTAIEGTIV STAMPTIVSD LNGLEIMNWV VSIFLLMTAV
STPIYGKLAD SIGRKPVFLF GIAVFVVGSA LCGIAQNMVE LILFRVIQGL GSGAVQPVAV
TIIADLYTLE KRAKMLGLNS GFWGVASVIA PLLGGFIVQH LSWHWIFYIN VPLGIIAFLL
VIFFLKEKKT SSNSTLDLKG TTCLVIFLLA LMIFLQELED GLNLVLLGLV AIIIISAIIF
FKTEKRAKDP IMPLDMLSSK EFTMINLITL LISGVVIGFE FYIPTWMQGI NATSASVAGF
AVTPSSLMWI VGSFLIGGML GRWGIKKTYD YMLLILIIAD LALILVPIYT SFWVFCLIAA
FNGTAFGAIT TASQVRSQVL VGRDKIGVAT SFNTLMKYLG QTMMVSIYGI TFNMVVAKHL
AHYPNLTQKM MNDIVSADKA KHLAANLIPG LRQVLLSGLK SVYVVSLIVI VLSLILNQLY
RQKKIAK
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