Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LGAS_0443 |
Symbol | |
ID | 4438847 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus gasseri ATCC 33323 |
Kingdom | Bacteria |
Replicon accession | NC_008530 |
Strand | + |
Start bp | 473005 |
End bp | 473550 |
Gene Length | 546 bp |
Protein Length | 181 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 639672301 |
Product | hypothetical protein |
Protein accession | YP_814286 |
Protein GI | 116629114 |
COG category | [S] Function unknown |
COG ID | [COG4470] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00000000176531 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 59 |
Fosmid unclonability p-value | 0.574737 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAGTATA AAGAAGCAGA TAAAGAACAA CCGCTTTATC ATCCTTTGGC TCATGTAATC GTTAATGAAG ATAAGATAAT GATTAATGGG CGAAAGTATG AAATTTTAGC TAATGTAAAA GATGCTCTAG ATATTGAAAT GCTAAAAGAG AAATATGATC CTTTCCTTGA CCAGTACGAT TATTTAGTAG GGGACATTTC AAGTGAGCAT TTAAGATTAA AAGGATTTTA CGATGAAAAA GATCGCGTTG CAATTGATAA AAAAGCTAAT GCGATTGTGG ATTATTTAGA GGAATATTGT AATCCTGGCA GTGCATATTT TGTTTTACGA CTAGCTCAAG AAAATCAGAT TAAAAAGGTT GCATTTGGCA GACAAAATAA GAGAAAAAAT ATGTCTAATA ATCGCTATCA TTCTAAACGT CCCTACTTTA AAGAAAGACG TGTCCACAAA ACAAGAATTG GTGGCCATAA GACAGCTGTA AAATTTCAAC GTGGAAAAGG AAGTCACAAG AATAAAGGCT TCGTAATTAA GAAAAGAAAG GGCTAA
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Protein sequence | MEYKEADKEQ PLYHPLAHVI VNEDKIMING RKYEILANVK DALDIEMLKE KYDPFLDQYD YLVGDISSEH LRLKGFYDEK DRVAIDKKAN AIVDYLEEYC NPGSAYFVLR LAQENQIKKV AFGRQNKRKN MSNNRYHSKR PYFKERRVHK TRIGGHKTAV KFQRGKGSHK NKGFVIKKRK G
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