Gene LGAS_0443 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLGAS_0443 
Symbol 
ID4438847 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus gasseri ATCC 33323 
KingdomBacteria 
Replicon accessionNC_008530 
Strand
Start bp473005 
End bp473550 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content33% 
IMG OID639672301 
Producthypothetical protein 
Protein accessionYP_814286 
Protein GI116629114 
COG category[S] Function unknown 
COG ID[COG4470] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000176531 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones59 
Fosmid unclonability p-value0.574737 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGTATA AAGAAGCAGA TAAAGAACAA CCGCTTTATC ATCCTTTGGC TCATGTAATC 
GTTAATGAAG ATAAGATAAT GATTAATGGG CGAAAGTATG AAATTTTAGC TAATGTAAAA
GATGCTCTAG ATATTGAAAT GCTAAAAGAG AAATATGATC CTTTCCTTGA CCAGTACGAT
TATTTAGTAG GGGACATTTC AAGTGAGCAT TTAAGATTAA AAGGATTTTA CGATGAAAAA
GATCGCGTTG CAATTGATAA AAAAGCTAAT GCGATTGTGG ATTATTTAGA GGAATATTGT
AATCCTGGCA GTGCATATTT TGTTTTACGA CTAGCTCAAG AAAATCAGAT TAAAAAGGTT
GCATTTGGCA GACAAAATAA GAGAAAAAAT ATGTCTAATA ATCGCTATCA TTCTAAACGT
CCCTACTTTA AAGAAAGACG TGTCCACAAA ACAAGAATTG GTGGCCATAA GACAGCTGTA
AAATTTCAAC GTGGAAAAGG AAGTCACAAG AATAAAGGCT TCGTAATTAA GAAAAGAAAG
GGCTAA
 
Protein sequence
MEYKEADKEQ PLYHPLAHVI VNEDKIMING RKYEILANVK DALDIEMLKE KYDPFLDQYD 
YLVGDISSEH LRLKGFYDEK DRVAIDKKAN AIVDYLEEYC NPGSAYFVLR LAQENQIKKV
AFGRQNKRKN MSNNRYHSKR PYFKERRVHK TRIGGHKTAV KFQRGKGSHK NKGFVIKKRK
G