| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LGAS_0382 |
|---|
| Symbol | |
|---|
| ID | 4440313 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Lactobacillus gasseri ATCC 33323 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008530 |
|---|
| Strand | + |
|---|
| Start bp | 397606 |
|---|
| End bp | 399165 |
|---|
| Gene Length | 1560 bp |
|---|
| Protein Length | 519 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 639672240 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_814225 |
|---|
| Protein GI | 116629053 |
|---|
| COG category | [D] Cell cycle control, cell division, chromosome partitioning |
|---|
| COG ID | [COG1196] Chromosome segregation ATPases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.000000753973 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.0000000239373 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | GTGGAGGACG TAGCAATGAA GAACAAAGAT AAATTATTAT ATGTATCCGC AGCTGTGCTA
GCTGCTGGAT CTGTAGCCGG TGTTAAGACT ACAACTGTTA AGGCTGCTGA AGTAAAGCAA
GCTAATGTTA ATGCTAATAG CAAGCTAGAC TTAAATAAAG CTTCGCAAGA AAAGCAAGCA
GCAGCTCAAG ACAAGACTGC ACAAGGTCAA ATCAAGCAAG ATACTGCAAC TGTTCAAAAT
ACGCAAGATC AAATTAAACA AGATCAAGCA GCTAAGACGC AAGCAGAAAC TGCTAAAACT
GAAGCTCAAA ATACTTTGCC AGCTAAACAA GAAGCAGTTT CAAGTGCTCA AACTAAGTTA
GATCAAGCAA AGAATGATTT AACTCAAACT CAAGCTCAAA ATAAAGATTT GCATGCGCAA
TATGATACTA CTACTGAAAA TGCAGTACAT ACTGCTCAAG AAGCAGAAAA GAAGTTAGAT
CAAAAAGTTA ATGACTTAAC TGGTCAAGTT CAAACTGCTC AAAATAAGCA AACTGATTTG
CTTAACCAAA GAACTAGCGC TGAAAGTGAA ATTAAGACTA ATACTGAGAC TCTTAACAAT
GTTAATGAGC AATTAAATAA GGCTCAAGCA GATAGTGCTC AAGCCCAAAA GCATTTTGAC
GCAGTACAAA AAGCTTACGC ACCTATCCAA AATGAATATA ATGCTAAGAA GGCAAATGCT
GAAAAAGCAG CAACCAATTT GAAGCAAAAT GAGACTGATT TAGCTCAAAG TCAAAAGCAA
TTAACTGATT TGCAAACTAA GAACAATGAT TTAGCTAAGA CTGTTAATGA CACTCAAGGT
CAATTGGACA ATGCTAATAA AGATCTAGCT AACGCTAAGA CTGATGTAAG TCAAAGTCAA
ACTAAGTTGA ATGATGTTCA AAATCAAAGT AATGATATTA ACGGTAAGTT AACTAATGCT
ATTGTTAAAC GAGATCAAGC AAAGAGTGCC TTAGATTCAC AAAGTGAAAA TCAAACTAAG
ATTATTATCA CACCTGAATT TAATAAAGCA TTTCATAAGT GGAATGATAA TCATGATCCA
AATTACGTAC AATGGACTCC TGAAAATGAT GCTGAAATGG TCAAAGAATT AGGTGCGTTA
TCAAAACAAG AAGCAGAAAT GAATCATTTC GAACATAATG CGAAAGATAA AGAACAAAAG
ATTGATATGA TGCATTTGAC TTATGAACAA CGCTTAGAAG CTAATAAATT TGGTATTAAT
TTGGTTAATC AAATCCGTAC CCAAATGGGT AAAAAGCCAG TGAAGTTGAC AGTCGGATCA
TTAAAATATG CTAATGATGT GGCTAAGTAT TATGAAGCAG ACCATCCAAA AGATTCGTTT
TCTAACGGTA ATGTTGATGG AAGTCACCCA GGTCATGATA CAAAGGCAAT TAATAAAGCC
TTGGTTGAAA ACGGCGTGAA GCCTGGTATG GGGGGGGAGA AGCCGGCTAC TATGGTGTTT
GGTATGGTGA TGACCTATAC GGACATTCTA CAGCATATAT TAACAATATG GACGATTTGA
|
|---|
| Protein sequence | MEDVAMKNKD KLLYVSAAVL AAGSVAGVKT TTVKAAEVKQ ANVNANSKLD LNKASQEKQA
AAQDKTAQGQ IKQDTATVQN TQDQIKQDQA AKTQAETAKT EAQNTLPAKQ EAVSSAQTKL
DQAKNDLTQT QAQNKDLHAQ YDTTTENAVH TAQEAEKKLD QKVNDLTGQV QTAQNKQTDL
LNQRTSAESE IKTNTETLNN VNEQLNKAQA DSAQAQKHFD AVQKAYAPIQ NEYNAKKANA
EKAATNLKQN ETDLAQSQKQ LTDLQTKNND LAKTVNDTQG QLDNANKDLA NAKTDVSQSQ
TKLNDVQNQS NDINGKLTNA IVKRDQAKSA LDSQSENQTK IIITPEFNKA FHKWNDNHDP
NYVQWTPEND AEMVKELGAL SKQEAEMNHF EHNAKDKEQK IDMMHLTYEQ RLEANKFGIN
LVNQIRTQMG KKPVKLTVGS LKYANDVAKY YEADHPKDSF SNGNVDGSHP GHDTKAINKA
LVENGVKPGM GGEKPATMVF GMVMTYTDIL QHILTIWTI
|
|---|
| |