Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LGAS_0381 |
Symbol | |
ID | 4440312 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus gasseri ATCC 33323 |
Kingdom | Bacteria |
Replicon accession | NC_008530 |
Strand | + |
Start bp | 396208 |
End bp | 397254 |
Gene Length | 1047 bp |
Protein Length | 348 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 639672239 |
Product | putative DNA-binding/iron metalloprotein/AP endonuclease |
Protein accession | YP_814224 |
Protein GI | 116629052 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0533] Metal-dependent proteases with possible chaperone activity |
TIGRFAM ID | [TIGR00329] metallohydrolase, glycoprotease/Kae1 family |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.0239405 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.000000236514 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | TTGACAAAAA AAGATATTCG AATTTTAGCA TTTGAAAGCT CATGTGATGA AACTTCTACC GCCGTAATTA AAAATGGGCG TGAAATCGAA AGCTTAATTG TGGCTACTCA AATTAAAAGT CACCAACGTT TTGGTGGGGT AGTGCCAGAA GTAGCAAGCC GTCACCATAT TGAAGTAATT ACGCAAATTA CTAAGGAAGC TTTAGCTGAA GCAAACGCTA CTTGGGATGA TATTGATGCA ATTGCTGTTA CCTATGGACC AGGCCTAGTT GGAGCTTTGT TAATTGGGGT TAGTGCCGCA AAAGCAGCTT CAATGGCAAC TGGAATTCCA TTGATTGGCG TTGATCACAT TATGGGCCAC ATTATGGCAG CGCAATTAAA GGATGAAATT GAATATCCAG CACTTGCCTT GCAAGTTTCT GGTGGTCATA CTGAAATTGT CTTGATGAAA GATCCGATCC ACTTTGAGAT TGTGGGCGAT ACAAGAGACG ATGCAGCTGG TGAAGCTTAT GACAAGATTG GTCGTGTTTT AGGAGTTAAT TATCCAGCAG GTAAGACGAT TGATGAGTGG GCACATAAAG GTAAAGATAC TTTCCACTTC CCACGTGCAA TGATGGAAGA TGATGATTAT GACTTTTCAT TATCAGGATT AAAGAGTGCC TTTATCAACA CTTGCCACCA TGCAGATCAA ATTCATGAAA AGCTTGATAA GTATGACTTA GCTGCCAGTT TTCAAGCATC AGTTGTTGAT GTGTTAAGCC ACAAGACAAT TAGAGCGATC AAAGAATATA AGCCCAAGAC ATTCATCTTA GGCGGCGGTG TCGCCGCGAA CCACGGTTTA CGTGATAGAT TAGCAGAAGA GATTGAAAAG TTGCCTGCTG ATATTAAGCC AAAGGTGATT TTACCGGACT TGAAACTTTG CGGAGACAAT GCGGCAATGA TTGGAGCAGC TGCATATAAC TTGTACAAGG CTGGTAAGTT TAGTGATGAG AATTTGAATG CAGATCCATC ACTTGAGTTG CCATATGCGG ATAGTATGCT GAAATAG
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Protein sequence | MTKKDIRILA FESSCDETST AVIKNGREIE SLIVATQIKS HQRFGGVVPE VASRHHIEVI TQITKEALAE ANATWDDIDA IAVTYGPGLV GALLIGVSAA KAASMATGIP LIGVDHIMGH IMAAQLKDEI EYPALALQVS GGHTEIVLMK DPIHFEIVGD TRDDAAGEAY DKIGRVLGVN YPAGKTIDEW AHKGKDTFHF PRAMMEDDDY DFSLSGLKSA FINTCHHADQ IHEKLDKYDL AASFQASVVD VLSHKTIRAI KEYKPKTFIL GGGVAANHGL RDRLAEEIEK LPADIKPKVI LPDLKLCGDN AAMIGAAAYN LYKAGKFSDE NLNADPSLEL PYADSMLK
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