Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LGAS_0367 |
Symbol | |
ID | 4440298 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus gasseri ATCC 33323 |
Kingdom | Bacteria |
Replicon accession | NC_008530 |
Strand | + |
Start bp | 386790 |
End bp | 387272 |
Gene Length | 483 bp |
Protein Length | 160 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 639672225 |
Product | cytosine/adenosine deaminase |
Protein accession | YP_814210 |
Protein GI | 116629038 |
COG category | [F] Nucleotide transport and metabolism [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0590] Cytosine/adenosine deaminases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 64 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 0.0000211246 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTTTGAAA AAAAAGATAA GGAAAAATAC ATGCAGCTAG CTTTTGCACA GGCCAAAAAA GCTGAAGATC AAGGAGAAGT GCCGATTGGT GCAATTGTTG TGGATAAAGA TGGAAATGTA ATTGGAGAAG GTTACAACAG ACGTGAGCTT GATGAGGATG CAACGCAGCA TGCTGAAATG ATTGCAATTA GACAAGCTTG TCAAAATCTA GGTTCATGGC GCTTGGTAGA TTGCAGTTTA TTCATTACGC TTGAACCATG TCCGATGTGC AGCGGTGCAA TTATTAACTC ACGGCTAGCT GAAGTGTATT ATGGCGCTTT TGACCCCAAG GCTGGAGCAG CTGGAAGTGT AATTGATCTA TTCAAGGTGG AAAAATTTAA TCATCATCCT AAAGTTTTTG GTGGCTTATT TAAAGATCAA GCGGCACAGA TGCTAAAAGA CTTTTTCCGC GAAATTAGGC GTAAACAAAA GCAAGATAAA TAG
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Protein sequence | MFEKKDKEKY MQLAFAQAKK AEDQGEVPIG AIVVDKDGNV IGEGYNRREL DEDATQHAEM IAIRQACQNL GSWRLVDCSL FITLEPCPMC SGAIINSRLA EVYYGAFDPK AGAAGSVIDL FKVEKFNHHP KVFGGLFKDQ AAQMLKDFFR EIRRKQKQDK
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