| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LGAS_0361 |
|---|
| Symbol | rplJ |
|---|
| ID | 4440292 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Lactobacillus gasseri ATCC 33323 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008530 |
|---|
| Strand | + |
|---|
| Start bp | 383500 |
|---|
| End bp | 384072 |
|---|
| Gene Length | 573 bp |
|---|
| Protein Length | 190 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 639672219 |
|---|
| Product | 50S ribosomal protein L10 |
|---|
| Protein accession | YP_814204 |
|---|
| Protein GI | 116629032 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0244] Ribosomal protein L10 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.0000000000502234 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 0.0000804712 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGTCTTTTT GGCATGGAGT TTTTATTTCG GCTGATAGAA TTTATCTTAA AGTAAATTTG
GAGGTGAATT CGTTGAGTAA AGCAATCATT GCTAAAAAAG AAAAGCTTGT TGATGACTTT
GCAGCAGAAC TTAAGGAAGC TAAAGCTATC TTAGTAATTG ACTACTTAGG TTTAACTGTT
GAAGAAGTAA CTAACTTACG TAAGGATTTA CGTGATTCTA ACGTTAAGAT GAAAGTTATC
AAGAATACTT ACTTAAAGCG TGCTGCTGAA AAGGCTGGTA TCGAAGGTTT AGACGATACT
TTTGTTGGTC CTACTGCTGT TGTTTACACT GCTGATGCAG ATGACATTAC TGAACCAGCT
CGTATTGTTT CTAAATACGA AGATGATATC GACGCATTAT CAATTAAAGG TGGTATGCTC
GAAGGTAAGG TTGCCAGCCA AGAAGAAATC AAGAAACTTG CAGCTATTCC AGGTCGCGAA
GGTTTACTTT CAATGCTTGT ATCTGTATTA CAAGCTCCAG TTCGCAACTT TGCATATGCT
GTTAAGGCTG TCGCTGATTC AAAAGACGAA TAA
|
|---|
| Protein sequence | MSFWHGVFIS ADRIYLKVNL EVNSLSKAII AKKEKLVDDF AAELKEAKAI LVIDYLGLTV
EEVTNLRKDL RDSNVKMKVI KNTYLKRAAE KAGIEGLDDT FVGPTAVVYT ADADDITEPA
RIVSKYEDDI DALSIKGGML EGKVASQEEI KKLAAIPGRE GLLSMLVSVL QAPVRNFAYA
VKAVADSKDE
|
|---|
| |