Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LGAS_0355 |
Symbol | |
ID | 4440286 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus gasseri ATCC 33323 |
Kingdom | Bacteria |
Replicon accession | NC_008530 |
Strand | + |
Start bp | 379278 |
End bp | 379829 |
Gene Length | 552 bp |
Protein Length | 183 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 639672213 |
Product | transcription antiterminator |
Protein accession | YP_814198 |
Protein GI | 116629026 |
COG category | [K] Transcription |
COG ID | [COG0250] Transcription antiterminator |
TIGRFAM ID | [TIGR00922] transcription termination/antitermination factor NusG |
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Plasmid Coverage information |
Num covering plasmid clones | 55 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 0.000436573 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGTTGAAA CCAGCGAAAA GAAATGGTAC GTTTTACACA CTTATTCTGG CTACGAAGAA AAGGTTAAGA AAGATTTACT TTCTAGAGCC CAATCAATGG GAATGCAAAA CTATATCTTT CGTGTAATTG TTCCTGAAGA GCAAAAGACT GAAACTGTTC GTGGTAAGAA ACAAGAAGTT GATGAAAAGG TATTTCCAGG ATATGTTTTA GTAGAAATGG TAATGACTGA CGAAAGTTGG TACGTTGTTA GAAATACGCC AAACGTTACT GGATTTGTTG GCAGTCACGG TGGTGGATCA AAGCCATCTC CTTTATATGA TGAAGAAATC GAAAGAATTC TTAAGTCTCA AGGACAACCA GCTAAGGAGC CAAAAGCTGA CTATGAAGTT GGTGAAACAG TAACTATTAT CGATGGTGCA TTTAGCGGCA TGAGCGGTAA AATTACAGAA ATTAACCCAG AAAAAGATAA ACTTTATGTT TCAATTGATA TGTTCGGCAG AGAAACAAAC GCTGAACTTG ACTATAACCA AGTAAAAGAA TTTGATGAAT AA
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Protein sequence | MVETSEKKWY VLHTYSGYEE KVKKDLLSRA QSMGMQNYIF RVIVPEEQKT ETVRGKKQEV DEKVFPGYVL VEMVMTDESW YVVRNTPNVT GFVGSHGGGS KPSPLYDEEI ERILKSQGQP AKEPKADYEV GETVTIIDGA FSGMSGKITE INPEKDKLYV SIDMFGRETN AELDYNQVKE FDE
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