Gene LGAS_0355 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLGAS_0355 
Symbol 
ID4440286 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus gasseri ATCC 33323 
KingdomBacteria 
Replicon accessionNC_008530 
Strand
Start bp379278 
End bp379829 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content36% 
IMG OID639672213 
Producttranscription antiterminator 
Protein accessionYP_814198 
Protein GI116629026 
COG category[K] Transcription 
COG ID[COG0250] Transcription antiterminator 
TIGRFAM ID[TIGR00922] transcription termination/antitermination factor NusG 


Plasmid Coverage information

Num covering plasmid clones55 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value0.000436573 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGTTGAAA CCAGCGAAAA GAAATGGTAC GTTTTACACA CTTATTCTGG CTACGAAGAA 
AAGGTTAAGA AAGATTTACT TTCTAGAGCC CAATCAATGG GAATGCAAAA CTATATCTTT
CGTGTAATTG TTCCTGAAGA GCAAAAGACT GAAACTGTTC GTGGTAAGAA ACAAGAAGTT
GATGAAAAGG TATTTCCAGG ATATGTTTTA GTAGAAATGG TAATGACTGA CGAAAGTTGG
TACGTTGTTA GAAATACGCC AAACGTTACT GGATTTGTTG GCAGTCACGG TGGTGGATCA
AAGCCATCTC CTTTATATGA TGAAGAAATC GAAAGAATTC TTAAGTCTCA AGGACAACCA
GCTAAGGAGC CAAAAGCTGA CTATGAAGTT GGTGAAACAG TAACTATTAT CGATGGTGCA
TTTAGCGGCA TGAGCGGTAA AATTACAGAA ATTAACCCAG AAAAAGATAA ACTTTATGTT
TCAATTGATA TGTTCGGCAG AGAAACAAAC GCTGAACTTG ACTATAACCA AGTAAAAGAA
TTTGATGAAT AA
 
Protein sequence
MVETSEKKWY VLHTYSGYEE KVKKDLLSRA QSMGMQNYIF RVIVPEEQKT ETVRGKKQEV 
DEKVFPGYVL VEMVMTDESW YVVRNTPNVT GFVGSHGGGS KPSPLYDEEI ERILKSQGQP
AKEPKADYEV GETVTIIDGA FSGMSGKITE INPEKDKLYV SIDMFGRETN AELDYNQVKE
FDE