| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LGAS_0342 |
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| Symbol | |
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| ID | 4440595 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactobacillus gasseri ATCC 33323 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008530 |
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| Strand | + |
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| Start bp | 366793 |
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| End bp | 367152 |
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| Gene Length | 360 bp |
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| Protein Length | 119 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 639672201 |
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| Product | cellobiose-specific PTS system IIA component |
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| Protein accession | YP_814186 |
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| Protein GI | 116629014 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1447] Phosphotransferase system cellobiose-specific component IIA |
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| TIGRFAM ID | [TIGR00823] phosphotransferase system enzyme II, lactose-specific, factor III |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 5.82955e-16 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.00000149023 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGGTTAGTA AAGAAGAAAT TTCGATGGTT GGATTTACAA TTGTTGCTTA TGCTGGAGAT
GCCAAAACAG ACTTGTTAAA TGCTCTTAAA TTAGCACGTG AAGGGAAGTT TGAAGAAGCT
GAAAAACTGA TCGAAGAAGC AAATAATTCA TTAGTTGATG CGCATAATGC ACAGACTAAG
TTAATGAGTC AAGAAGCTAG TGGTGAAGAA TTAGAAACAA CTTTTATTAT GTCTCATGGA
CAAGATACAT TAATGACTAC AATGCTTTTA CGTGATGAAG TGAAATATTT TATTGATTTG
TATAAGCAAA ATTTAGCTTT GCGAGCTGAA ATTGAGCAGC TTAAAGAAAA AATGAACTAA
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| Protein sequence | MVSKEEISMV GFTIVAYAGD AKTDLLNALK LAREGKFEEA EKLIEEANNS LVDAHNAQTK
LMSQEASGEE LETTFIMSHG QDTLMTTMLL RDEVKYFIDL YKQNLALRAE IEQLKEKMN
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