Gene LGAS_0313 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLGAS_0313 
SymbolrpmJ 
ID4440566 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus gasseri ATCC 33323 
KingdomBacteria 
Replicon accessionNC_008530 
Strand
Start bp344328 
End bp344444 
Gene Length117 bp 
Protein Length38 aa 
Translation table11 
GC content38% 
IMG OID639672172 
Product50S ribosomal protein L36 
Protein accessionYP_814157 
Protein GI116628985 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0257] Ribosomal protein L36 
TIGRFAM ID[TIGR01022] ribosomal protein L36, bacterial type 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.00358606 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value6.93478e-29 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGAAAGTTA GACCATCTGT TAAACCAATG TGTGAACATT GCAAGATTAT CAAAAGACAT 
GGTCGTGTTA TGGTGATTTG CTCTGCAAAC CCTAAGCACA AACAACGTCA AGGTTAA
 
Protein sequence
MKVRPSVKPM CEHCKIIKRH GRVMVICSAN PKHKQRQG