Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LGAS_0313 |
Symbol | rpmJ |
ID | 4440566 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus gasseri ATCC 33323 |
Kingdom | Bacteria |
Replicon accession | NC_008530 |
Strand | + |
Start bp | 344328 |
End bp | 344444 |
Gene Length | 117 bp |
Protein Length | 38 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 639672172 |
Product | 50S ribosomal protein L36 |
Protein accession | YP_814157 |
Protein GI | 116628985 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0257] Ribosomal protein L36 |
TIGRFAM ID | [TIGR01022] ribosomal protein L36, bacterial type |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.00358606 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 6.93478e-29 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
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Sequence |
Gene sequence | ATGAAAGTTA GACCATCTGT TAAACCAATG TGTGAACATT GCAAGATTAT CAAAAGACAT GGTCGTGTTA TGGTGATTTG CTCTGCAAAC CCTAAGCACA AACAACGTCA AGGTTAA
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Protein sequence | MKVRPSVKPM CEHCKIIKRH GRVMVICSAN PKHKQRQG
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