| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LGAS_0280 |
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| Symbol | lysS |
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| ID | 4438720 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactobacillus gasseri ATCC 33323 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008530 |
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| Strand | + |
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| Start bp | 316838 |
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| End bp | 318352 |
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| Gene Length | 1515 bp |
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| Protein Length | 504 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 639672139 |
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| Product | lysyl-tRNA synthetase |
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| Protein accession | YP_814126 |
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| Protein GI | 116628954 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1190] Lysyl-tRNA synthetase (class II) |
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| TIGRFAM ID | [TIGR00499] lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0337786 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 0.000160762 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGGCAAAGA ATGAAATGAA CGACCAACTA ATTGTTCGTC GTGAAAAAAT GGACGAAATG
CGTGAAAATG GCATTGAACC TTTTGGTGTA AGAAAGTTCG ATCGTCAAGA TTTAGCTCGT
ACTTTAAATG AAAAGTATAG TAAAGAAGAT AAAGATGAAT TAAATGCAGA TATGCCTACG
ACCAAAATTG CAGGTCGTAT GCTTGCAAAA CGTGGTAAGG GTAAAGTAGG TTTTGCTGAT
CTTTATGACC GTACTGGTAA GATTCAAATC TATGTACGTA AAGATATTGT TGGCGAAGAC
AACTACAAGA TTTTTAAGAA ATCAGATATT GGTGACTTCT TAGGTATTGA TGGCGAAGTA
ATGAAAACTG ATACTGGTGA GTTAACTATT CGTGCAACTC ACGTTACTTT CTTATCTAAG
GCTCTTCGTC CCTTACCTAA TAAATGGGAT GGTTTAAAAG ATGTTGAACA AATCTATCGT
CAACGCTATC TTGATTTGAT TACTAATCAC GAAAGTTACA TGCGTTTTGT TCATCGTACT
CAAATTATTC AAGCTATTCG TAACTACTTA AATAAGCAAG ACTTCTTGGA AGTTGAAACT
CCAGTTCTTC ACAATATTCC AGGTGGTGCT GAAGCACGTC CATTTATTAC TCACCACAAC
GCTTTAGATA TTGATCTTTA TATGAGAATC GCTTTGGAAC TTCCATTGAA GCGTTTGATT
GTCGGTGGTA TGGAGAGAGT TTATGAAATT GGTCGAGTAT TCAGAAACGA AGGTGTTGAT
ACTCGCCACA ATCCTGAATT TACTGAGCTT GAAACTTATG CTGCTTACTG GGATTTCCAC
GATGTCATGG ATGAAGCAGA AGAAATTATC AGAGCAGCTG CTAAAGTTGT TTCTCCAGAC
GGTAAGATTA ACTACCAAGG TACTGATATT GACTTAGGTA AGCCATTCCG CCGTGTTCAT
ATGGTTGACC TAATTAAGGA AAAGACTGGT GTCGATTTCT GGAAAGAAAT GACTGACGAA
GAAGCTAAGA AGATCGCCGA AGAACATGGA ATTCATACTG AACCATTTTG GAAAGTTGGT
CATGTAATTA ATGCTTTCTT TGATGAATTT TGTGAGAAGA CTATTGTTGA TCCAACCTTT
GTGTATGGTC ACCCTGTAGA AATTTCACCA CTTGCTAAAA AGAATGCAGA TGATCCAAGA
TTTACTGATC GTTTCGAAAT CTTTATTTTA GGAATGGAAT ACGGAAATGC CTTTTCAGAG
TTAAATGATC CAGTTGATCA ACGTCACCGT TTTGAAGAAC AAATGGAAGA ACGCGAAGCT
GGTAACGATG AAGCTGATAT GATTGATGAA GATTATATCC GTGCTATGGA ATTCGGTATG
CCTCCTACAG GTGGTTTAGG TATCGGTATC GACCGTTTGG TAATGCTTTT AACTGACGCT
CCAGCTATCC GTGATGTATT GCTCTTCCCA ACAATGCGTC CTGAAAAGGT TGAAGATGTT
GATGCAGAAG TATAA
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| Protein sequence | MAKNEMNDQL IVRREKMDEM RENGIEPFGV RKFDRQDLAR TLNEKYSKED KDELNADMPT
TKIAGRMLAK RGKGKVGFAD LYDRTGKIQI YVRKDIVGED NYKIFKKSDI GDFLGIDGEV
MKTDTGELTI RATHVTFLSK ALRPLPNKWD GLKDVEQIYR QRYLDLITNH ESYMRFVHRT
QIIQAIRNYL NKQDFLEVET PVLHNIPGGA EARPFITHHN ALDIDLYMRI ALELPLKRLI
VGGMERVYEI GRVFRNEGVD TRHNPEFTEL ETYAAYWDFH DVMDEAEEII RAAAKVVSPD
GKINYQGTDI DLGKPFRRVH MVDLIKEKTG VDFWKEMTDE EAKKIAEEHG IHTEPFWKVG
HVINAFFDEF CEKTIVDPTF VYGHPVEISP LAKKNADDPR FTDRFEIFIL GMEYGNAFSE
LNDPVDQRHR FEEQMEEREA GNDEADMIDE DYIRAMEFGM PPTGGLGIGI DRLVMLLTDA
PAIRDVLLFP TMRPEKVEDV DAEV
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