Gene LGAS_0270 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLGAS_0270 
Symbol 
ID4438778 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus gasseri ATCC 33323 
KingdomBacteria 
Replicon accessionNC_008530 
Strand
Start bp303218 
End bp303775 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content34% 
IMG OID639672129 
Productpeptidyl-tRNA hydrolase 
Protein accessionYP_814116 
Protein GI116628944 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0193] Peptidyl-tRNA hydrolase 
TIGRFAM ID[TIGR00447] peptidyl-tRNA hydrolase 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.0378567 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones73 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGTTAA TTGCAGGTTT AGGAAATCCA GGTAAAAAAT ATGATCAGAC CAAGCATAAT 
ACTGGCTTTA TGGCATTAGA CCATTATTTA AGCAAAAATA ACTTAGATCT AGATAAAGAT
AAGTTTGAGG GACTATGGAC CAAGCAGAAG GTTAACGGTG AAGATGTGAT CTTTCTTGAA
CCACAAACTT TTATGAATGA TTCAGGAAAG TCAATTGCAC AAGTAGCCAA TTTCTTTAAG
ATTGCTCCAG AAGATATCTT AGTTATTCAC GACGACATGG ATATGCCAAT CGGAAAGATT
AGAATTCGTG CAAATGGAAA ATCAGGAGGT CATAATGGAA TTAAGAGTAT TATGGCCTGT
TTAGGAACAA ATAATTTCAA CCGATTAAAG ATTGGAATTC GTCATCCGCA AAAAGAAAGT
GTTGTTTCTT GGGTATTAAG TCCTTTTAAT GATGAACAGC AAAAGTTAAT GGATGCAGCT
TTTGAGGTTA GTGAAAATAT CATTAATGAT TTCATTAAGG GAAAGAATGC CCAGTATTTA
ATGAATCAGT ACAATTAG
 
Protein sequence
MKLIAGLGNP GKKYDQTKHN TGFMALDHYL SKNNLDLDKD KFEGLWTKQK VNGEDVIFLE 
PQTFMNDSGK SIAQVANFFK IAPEDILVIH DDMDMPIGKI RIRANGKSGG HNGIKSIMAC
LGTNNFNRLK IGIRHPQKES VVSWVLSPFN DEQQKLMDAA FEVSENIIND FIKGKNAQYL
MNQYN