Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LGAS_0270 |
Symbol | |
ID | 4438778 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus gasseri ATCC 33323 |
Kingdom | Bacteria |
Replicon accession | NC_008530 |
Strand | + |
Start bp | 303218 |
End bp | 303775 |
Gene Length | 558 bp |
Protein Length | 185 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 639672129 |
Product | peptidyl-tRNA hydrolase |
Protein accession | YP_814116 |
Protein GI | 116628944 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0193] Peptidyl-tRNA hydrolase |
TIGRFAM ID | [TIGR00447] peptidyl-tRNA hydrolase |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.0378567 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 73 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGTTAA TTGCAGGTTT AGGAAATCCA GGTAAAAAAT ATGATCAGAC CAAGCATAAT ACTGGCTTTA TGGCATTAGA CCATTATTTA AGCAAAAATA ACTTAGATCT AGATAAAGAT AAGTTTGAGG GACTATGGAC CAAGCAGAAG GTTAACGGTG AAGATGTGAT CTTTCTTGAA CCACAAACTT TTATGAATGA TTCAGGAAAG TCAATTGCAC AAGTAGCCAA TTTCTTTAAG ATTGCTCCAG AAGATATCTT AGTTATTCAC GACGACATGG ATATGCCAAT CGGAAAGATT AGAATTCGTG CAAATGGAAA ATCAGGAGGT CATAATGGAA TTAAGAGTAT TATGGCCTGT TTAGGAACAA ATAATTTCAA CCGATTAAAG ATTGGAATTC GTCATCCGCA AAAAGAAAGT GTTGTTTCTT GGGTATTAAG TCCTTTTAAT GATGAACAGC AAAAGTTAAT GGATGCAGCT TTTGAGGTTA GTGAAAATAT CATTAATGAT TTCATTAAGG GAAAGAATGC CCAGTATTTA ATGAATCAGT ACAATTAG
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Protein sequence | MKLIAGLGNP GKKYDQTKHN TGFMALDHYL SKNNLDLDKD KFEGLWTKQK VNGEDVIFLE PQTFMNDSGK SIAQVANFFK IAPEDILVIH DDMDMPIGKI RIRANGKSGG HNGIKSIMAC LGTNNFNRLK IGIRHPQKES VVSWVLSPFN DEQQKLMDAA FEVSENIIND FIKGKNAQYL MNQYN
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