Gene LGAS_0260 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLGAS_0260 
Symbol 
ID4438803 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus gasseri ATCC 33323 
KingdomBacteria 
Replicon accessionNC_008530 
Strand
Start bp293786 
End bp294550 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content34% 
IMG OID639672119 
ProductABC-type uncharacterized transport system, ATPase component 
Protein accessionYP_814106 
Protein GI116628934 
COG category[R] General function prediction only 
COG ID[COG1101] ABC-type uncharacterized transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones70 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTAAGC CAATTTTAGA ATTAAAAGAT GTAAAGACTA CTGTAAAGAC AGCTGATGGT 
GAAATAGTTC CTATTTTAAA GGGAATAGAT TTAAAAATTA AAGCTGGGGA TTTTATTACT
ATTATTGGAA CGAACGGAGC AGGCAAATCT ACGCTGTTGA ACACTATTGC GGGTAGTTTA
AGACCAGATA GTGGTTTTCT TCTCCATAAT GGACTGGATA TTACTAAAAT GAGTGAAGAA
AAGCGGACAC AATTTATTGG ACGTGTTTTT CAAGATCCTA AGTTGGGGAC TGCTCCGAGA
ATGACAGTAG CGGAAAATCT TTTGTTAGCA ACTAAGAGAG GTAAGAGAAG ATTTTTAAGA
ATTAGAAAGT TAAAGCAAAA CTTACCACGT TTTAAAAAAT TAGCTGCAGT CATGAACAAT
GGCCTAGAAA ATCGCTTAAA TACTTTTGTA GAAGGTTTAT CAGGTGGTCA AAGACAAGCT
CTAAGTTTCT TAATGGCTAC GATTGAAAGA CCAGATATTT TGCTGCTAGA CGAGCATACA
GCAGCGCTAG ACCCACATAC AAGTGAAAAT TTATTGGCAG TAACTGATCA GCAGATTAAG
GAAAATAAAT TAACTGCTTT AATGATTACA CATCATATGG AAGACGCCTT AAAGTATGGG
AACCGTCTCT TAGTTTTAAA AGATGGAAAA GTTAAAGCTG ATATTAATGA AAGAGAAAAG
CAAAACTTAA AAGTAGGTGA TCTATATAAA TATTTTGAAG ATTAA
 
Protein sequence
MTKPILELKD VKTTVKTADG EIVPILKGID LKIKAGDFIT IIGTNGAGKS TLLNTIAGSL 
RPDSGFLLHN GLDITKMSEE KRTQFIGRVF QDPKLGTAPR MTVAENLLLA TKRGKRRFLR
IRKLKQNLPR FKKLAAVMNN GLENRLNTFV EGLSGGQRQA LSFLMATIER PDILLLDEHT
AALDPHTSEN LLAVTDQQIK ENKLTALMIT HHMEDALKYG NRLLVLKDGK VKADINEREK
QNLKVGDLYK YFED