Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LGAS_0260 |
Symbol | |
ID | 4438803 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus gasseri ATCC 33323 |
Kingdom | Bacteria |
Replicon accession | NC_008530 |
Strand | + |
Start bp | 293786 |
End bp | 294550 |
Gene Length | 765 bp |
Protein Length | 254 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 639672119 |
Product | ABC-type uncharacterized transport system, ATPase component |
Protein accession | YP_814106 |
Protein GI | 116628934 |
COG category | [R] General function prediction only |
COG ID | [COG1101] ABC-type uncharacterized transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 43 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 70 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTAAGC CAATTTTAGA ATTAAAAGAT GTAAAGACTA CTGTAAAGAC AGCTGATGGT GAAATAGTTC CTATTTTAAA GGGAATAGAT TTAAAAATTA AAGCTGGGGA TTTTATTACT ATTATTGGAA CGAACGGAGC AGGCAAATCT ACGCTGTTGA ACACTATTGC GGGTAGTTTA AGACCAGATA GTGGTTTTCT TCTCCATAAT GGACTGGATA TTACTAAAAT GAGTGAAGAA AAGCGGACAC AATTTATTGG ACGTGTTTTT CAAGATCCTA AGTTGGGGAC TGCTCCGAGA ATGACAGTAG CGGAAAATCT TTTGTTAGCA ACTAAGAGAG GTAAGAGAAG ATTTTTAAGA ATTAGAAAGT TAAAGCAAAA CTTACCACGT TTTAAAAAAT TAGCTGCAGT CATGAACAAT GGCCTAGAAA ATCGCTTAAA TACTTTTGTA GAAGGTTTAT CAGGTGGTCA AAGACAAGCT CTAAGTTTCT TAATGGCTAC GATTGAAAGA CCAGATATTT TGCTGCTAGA CGAGCATACA GCAGCGCTAG ACCCACATAC AAGTGAAAAT TTATTGGCAG TAACTGATCA GCAGATTAAG GAAAATAAAT TAACTGCTTT AATGATTACA CATCATATGG AAGACGCCTT AAAGTATGGG AACCGTCTCT TAGTTTTAAA AGATGGAAAA GTTAAAGCTG ATATTAATGA AAGAGAAAAG CAAAACTTAA AAGTAGGTGA TCTATATAAA TATTTTGAAG ATTAA
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Protein sequence | MTKPILELKD VKTTVKTADG EIVPILKGID LKIKAGDFIT IIGTNGAGKS TLLNTIAGSL RPDSGFLLHN GLDITKMSEE KRTQFIGRVF QDPKLGTAPR MTVAENLLLA TKRGKRRFLR IRKLKQNLPR FKKLAAVMNN GLENRLNTFV EGLSGGQRQA LSFLMATIER PDILLLDEHT AALDPHTSEN LLAVTDQQIK ENKLTALMIT HHMEDALKYG NRLLVLKDGK VKADINEREK QNLKVGDLYK YFED
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