Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LGAS_0259 |
Symbol | |
ID | 4438802 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus gasseri ATCC 33323 |
Kingdom | Bacteria |
Replicon accession | NC_008530 |
Strand | + |
Start bp | 292867 |
End bp | 293793 |
Gene Length | 927 bp |
Protein Length | 308 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 639672118 |
Product | ribose/xylose/arabinose/galactoside ABC-type transporter permease |
Protein accession | YP_814105 |
Protein GI | 116628933 |
COG category | [R] General function prediction only |
COG ID | [COG4120] ABC-type uncharacterized transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.0510641 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 68 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTCAAAGA AATGGGGTTG TGTACAGATG AATTTGATCG TATCTGCAAT TGGTCAAGGA TTATTATGGG CATTATTAGG CTTAGGATTA TATTTAACTT TTAGAATTTT AAATTTTGCT GATATGACAG TCGAAGGAAC TTTCCCATTA GGAGCAGCTG TGGCTGTTGC TAATCTTGCT CATGGAATGT CACCATATTT GGCTACTTTT TTAGCTTTGC TTGCGGGGAT GCTTGCAGGG TTAGTGACCG GTTTATTATA TACAAAGGGA AAAATTCCGA TTTTGCTTGC TGGTATTTTG ACGATGACTG CGATTTATTC AATTAACTTG AGAATTATGG GCGGTTCTAA TATTTCATTA ATTGGTAAGA AAACTCTGCT TAATAATGAA TTTTTGAGAT CTCTACCTCA GTATTTTAAT AGCGTGGTCT TAGGAATAAT AGTTGTAGTA ATTATTACAG GAATTTTGGT TTTCTTTTTA AATACAGATT TTGGTCAAGC TTTTATTGCT ACGGGAGATA ATCCTAAAAT GGCTAAGTCT TTAGGAATCT ATACTGATTC AATGATAATT ATCGGTTTAA TGCTTTCAAA CGGAATTGTT GCCTTGTGCG GAGCATTAAT TGCGCAAAAT AATGGCTATG CTGATATCAA TATGGGCATT GGAACGATTG TTATTGCTTT AGCTTCAATT ATTATTGGTG AAGTAGCTTT TGGAGAATTA ACGTTAAATC AAAGATTAGT AGCAGTGACT TTAGGGAGTA TTATTTATCG CTTAATTTTA TTAGCAGTCT TACAACTAGG CTTTTCAGCT AATGATTTAA ATTTAATTTC TTCAATTGTT TTGGCACTTT GCATGATGCT GCCACAATTA GAAAAAATTG TTCACTTGAA GAAGCCGATA GAGAAAGGAG TGAAGAAGCA TGACTAA
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Protein sequence | MSKKWGCVQM NLIVSAIGQG LLWALLGLGL YLTFRILNFA DMTVEGTFPL GAAVAVANLA HGMSPYLATF LALLAGMLAG LVTGLLYTKG KIPILLAGIL TMTAIYSINL RIMGGSNISL IGKKTLLNNE FLRSLPQYFN SVVLGIIVVV IITGILVFFL NTDFGQAFIA TGDNPKMAKS LGIYTDSMII IGLMLSNGIV ALCGALIAQN NGYADINMGI GTIVIALASI IIGEVAFGEL TLNQRLVAVT LGSIIYRLIL LAVLQLGFSA NDLNLISSIV LALCMMLPQL EKIVHLKKPI EKGVKKHD
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