Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LGAS_0258 |
Symbol | |
ID | 4438801 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus gasseri ATCC 33323 |
Kingdom | Bacteria |
Replicon accession | NC_008530 |
Strand | + |
Start bp | 291854 |
End bp | 292897 |
Gene Length | 1044 bp |
Protein Length | 347 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 639672117 |
Product | ABC-type uncharacterized transport system, periplasmic component |
Protein accession | YP_814104 |
Protein GI | 116628932 |
COG category | [R] General function prediction only |
COG ID | [COG2984] ABC-type uncharacterized transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.000000000182856 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 66 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATAGGGA TCTGCATGGA GTCAGATTCC TATTTTTTGT GGGGAAAAAT TATGAAAAGA ATGTATGGAT TAATTGCAAT TTTAATAACT TTTTTAGCAG TAGCTTTTTT CACTGAAAAT CGTGAACAAG AAGCAGATAA AAAAGTACCG CAGGTTGGGG TTTTAACTTT AATGCATCAC CCAGCTCTTG ATGAAATATA TCGTGGCTTT AAAGCAGAAT TAAAAGAAGC AGGATATATA GATGGAAAAA ATATCAAAAT TGATTATCAA AACGCAAATA ATGATCAAAG CAATTTGCGT ACTATGGCTA CTAAGTTAAC TGATGAACAG TCAAAGGTAC TTGTTGGAAT TACGACGCCA GCTGCTCAAG CATTGGCAAA TTCAACCAGT AAAACGCCAA TTGTTTTAGG AGCAGTAACA AATCCAAAAG CGAGTGGTTT AGTGAAAAAT GAACGCCATC CAGAATCAAA TGTAACTGGA GTATCCGACG CTGCTCCGAT TAAACAACAG TTAGATTTAA TTAAAGAATT TATGCCTAAT CTGAAAACAC TAGGAGTAAT TTATACTTCA AGCGATTCTT CTGCAGTTAG TGGTTTTCAT GAAATTGAAC AAGAATGTAA AAGAAGAAAA ATAAATTTAA AGGTATTTTC AATAGCAAAT AGCAATGATC TTAATCAGGT ATCAGAGCAA ATGTTTAGGC AGGTGGATGC GGCCATAGTA CCTACTGATA ATACAATTGC TGGAGCAATG GAAACTTTGG TTAAAAACGG AAATGCTGCT AAGAAACCTA TTTTTCCAGC GGCTGCAACA ATGGTAAAGC AAGGTGGCTT AGCAACATAT AGTGTTAATC AGTACAAACT GGGGCAGATG ACTGGAAAAA TGACAATTGC CATTTTAAAA GGTAAAAGGG TCAGTTCATT ACCAGTAGAA AGAGTTCAAA AAGGAGAACC TGTGGTTAAC TTAAAAGAAG CAAAAGAATT GAATCTCCAA GCGCCACAAA GATTTCTAAA AGAGTGTCAA AGAAATGGGG TTGTGTACAG ATGA
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Protein sequence | MIGICMESDS YFLWGKIMKR MYGLIAILIT FLAVAFFTEN REQEADKKVP QVGVLTLMHH PALDEIYRGF KAELKEAGYI DGKNIKIDYQ NANNDQSNLR TMATKLTDEQ SKVLVGITTP AAQALANSTS KTPIVLGAVT NPKASGLVKN ERHPESNVTG VSDAAPIKQQ LDLIKEFMPN LKTLGVIYTS SDSSAVSGFH EIEQECKRRK INLKVFSIAN SNDLNQVSEQ MFRQVDAAIV PTDNTIAGAM ETLVKNGNAA KKPIFPAAAT MVKQGGLATY SVNQYKLGQM TGKMTIAILK GKRVSSLPVE RVQKGEPVVN LKEAKELNLQ APQRFLKECQ RNGVVYR
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