Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LGAS_0257 |
Symbol | |
ID | 4438800 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus gasseri ATCC 33323 |
Kingdom | Bacteria |
Replicon accession | NC_008530 |
Strand | + |
Start bp | 289414 |
End bp | 291645 |
Gene Length | 2232 bp |
Protein Length | 743 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 639672116 |
Product | Alpha-galactosidase |
Protein accession | YP_814103 |
Protein GI | 116628931 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3345] Alpha-galactosidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.00000661357 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 60 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTGATG TAATTGATAA TAAATATTTT TATTTACATA ATGGTGCAGT CGCATACTTA TTTGGATTGT TGCCTAATCA CCAATTAGAG CACTTATATT ATGGTGAAGA TTTAGGTGAA TTATCTAAGA ACGATTTAGA ATATATGTCG CTTCATCCAA ATAAAGCTTC TGGAACAGTG AAATATTCAA AAAAAATTAA AAATTTTACA CTCGCTGATC GAATGCAGGA ATTCCCAACG TACGGTACAA GCGATTTTCG TGAGGGTGCT GTAAGTATTG AAAATGAGGG CGCGTATCTA TATCCTGATT TTAAATACGA TCATTTTGAG ATTACGACAG GTAAGAAAAG AAACTTAGAT TTTCCTACTT CATATGGAAA TGATAGTGAA AATTTAATTG TCTCCTTAAT TGATACTGAT CACCAGTTAG AATTGCAACT TTCATATAGT ATTTTTGAAA ACTGGTCGGC AATAGTGCGT AAGGCAACGA TTATTAATCA TGGTAAGCAA GAAGTTAAAC TTACTAACTT GCAAAGTACA GTTCTCGATT TGCCGAATGA TAGTTATGAT TTTCTGCAAT TATCTGGAGC TTGGACTAAA GAGCGGCATA TTACAACCCG TCCGTTAACG CAAGGAATTA CTAAAATTGA ATCGTTAAGA GGCGCGTCAA GCCATCAAGA AAATCCTTTT ATTGCACTTG TGGATAAGAA TGTGACAAAT GACAGTGGAA ATATATATGC AAGTAATTTA ATTTATTCTG GCAATTTTAT TAGCCAAGTG GAAGTTGATG AATGGGGACA AAGTAGGTTG ATGACCGGAA TCAATCCAGC TACTTTTAAG TGGAAATTGG CACCAAATCA GGATTTTTCT ACACCAGAAG CTGTCTTGTT TTACAGTAAG CAAGGCTTTA ACGGCTTAAT GAAGCAGACG CATAATTTTG TTAAAAAACA TATTATTGAT CAAAAATGGC AACAACGAGA TAGACTAATT GTAATTAATA ATTGGGAAGC TACTTATTTT GACTTCAATG AAGAAAAGCT GCTGAAATTG GCAGCTCAGG CTAACCAACT AGGAATTGAG TGTTTTGTTC TTGATGATGG ATGGTTTGGT AAACGAGATA GTGATAACAG TTCATTAGGA AATTGGACAG TGGATAAAAG AAAGTTTCCA CAAGGATTGG ATCATTTCAG TGCACAGGTG CATAAAATGG GGATGAAATT TGGCTTATGG TTTGAACCAG AAATGGTTTC AGCAGATACT GAACTATATA ATATGCATCC CGACTGGGTT GTTAGACATC CTTACAAGCG TTATTCAGTT GGACGCAGAC AATATGTACT TGATTTTGCA AATCCAGCAG TGGTAGATAA TATCTATCAG CAGATGGCTA AAATAATTGA AGATGCTCAA GTAGACTATA TTAAATGGGA TATGAATCGA AATATTACTG AGGCATATTC GCCGTATTTG TATTCTATTA ATCATCCCCA AGGTGAAATT TTCCACAGAT ATATTCAAGG TGTTTATAAG TTATACGCAA AGTTATTAAC AAGTTTTCCT GACCTGTTAA TTGAAGGTTG CGCTAGTGGT GGCGGACGCT TTGATTTAGG AATTCTATAT TATAGTCCAC AAATTTGGCC AAGTGATGAC AGTGATGCAG TAGAAAGATT AGATATTATG TCAGGAACCT TGTTGGCGTA TCCTTTATCT ACGTTTAGTA ATCATGTTTC TGCTGTTCCT AACGATCAAG TAAAAAGAAT AACAAGCTTA AAATTTAGAC AAAATGTTGC TTGCTTTGGT CCTTTAGGAT ATGAGTTAGA CCTAAATAAG TTATCAACAG AAGAAAAGAA CCAAATTAAA AATTGGATTA GATGGTATAA AGAAAATCGT AAATTGTTGG TCAATGGAAC TTTTGATCAA CTATTAAAAT TTGATCCCTC ACAAAATACT TATGCTTGGA GTGTAAGCAA TTCTAATAAA CAGATTGTCG GATTTTATCG CAAACTTGCG CGACCTAATG AAACTTTAGA TCAGTATCTC CCTCTTAAAC ATTTAAATGA TCATCAAAAA TATCAAATTA ATTTTGATCA GATGGTATCG GGTAGAGTTT TACAAAAATT TGGATTACGT GAACCATATC AATTCAATGC TTCAAATCCT GACACTGCGC AAATTAGTGG TGACTTTCAA TCGTATCTTT ATCAAATAAA AACTATTGAC AGAAAAATCT AA
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Protein sequence | MIDVIDNKYF YLHNGAVAYL FGLLPNHQLE HLYYGEDLGE LSKNDLEYMS LHPNKASGTV KYSKKIKNFT LADRMQEFPT YGTSDFREGA VSIENEGAYL YPDFKYDHFE ITTGKKRNLD FPTSYGNDSE NLIVSLIDTD HQLELQLSYS IFENWSAIVR KATIINHGKQ EVKLTNLQST VLDLPNDSYD FLQLSGAWTK ERHITTRPLT QGITKIESLR GASSHQENPF IALVDKNVTN DSGNIYASNL IYSGNFISQV EVDEWGQSRL MTGINPATFK WKLAPNQDFS TPEAVLFYSK QGFNGLMKQT HNFVKKHIID QKWQQRDRLI VINNWEATYF DFNEEKLLKL AAQANQLGIE CFVLDDGWFG KRDSDNSSLG NWTVDKRKFP QGLDHFSAQV HKMGMKFGLW FEPEMVSADT ELYNMHPDWV VRHPYKRYSV GRRQYVLDFA NPAVVDNIYQ QMAKIIEDAQ VDYIKWDMNR NITEAYSPYL YSINHPQGEI FHRYIQGVYK LYAKLLTSFP DLLIEGCASG GGRFDLGILY YSPQIWPSDD SDAVERLDIM SGTLLAYPLS TFSNHVSAVP NDQVKRITSL KFRQNVACFG PLGYELDLNK LSTEEKNQIK NWIRWYKENR KLLVNGTFDQ LLKFDPSQNT YAWSVSNSNK QIVGFYRKLA RPNETLDQYL PLKHLNDHQK YQINFDQMVS GRVLQKFGLR EPYQFNASNP DTAQISGDFQ SYLYQIKTID RKI
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