Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LGAS_0253 |
Symbol | |
ID | 4438796 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus gasseri ATCC 33323 |
Kingdom | Bacteria |
Replicon accession | NC_008530 |
Strand | + |
Start bp | 285412 |
End bp | 285864 |
Gene Length | 453 bp |
Protein Length | 150 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 639672112 |
Product | hypothetical protein |
Protein accession | YP_814099 |
Protein GI | 116628927 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.00207506 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 53 |
Fosmid unclonability p-value | 0.182428 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAAAT TACCACCGAT TCAGAAAATT TTAGAAGCTT ATACGGCGAT TGTGGATAAA CATGTGAATT TAACAAAAGA TCAGGCAGAA GTAGCTTCAT CTAATGGAGC AAAAACTTAT ACAGTAAATT GGGATGATAA TGAGTACCAT TCAAATGATA ATGCAACTTA TTGGCAAGGA TATGCCGGTT ATCCTGTAAT TGCCGTTTTA ATGCTACAGG GGAAATTGCC ATTTAATCAA AAACTAGCTG ATAATTTTAA ATCCGTTAAT TGGAATGAAA TAAATTCAAA GTTTAAGCGT AACTATGCCA AGGCTGCTAC TGAGGTTATT AAGAAAAAAG GGCTTGATGA AAATGAAGTA ATGGCAGAAC TTGGAGCTGT TTATGAAGAC TTAAAAAAGT TACCAATTAC AATTAAGCGC GGTTCTCTTA GGCCACCTAA GGCGAGAAAA TAA
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Protein sequence | MKKLPPIQKI LEAYTAIVDK HVNLTKDQAE VASSNGAKTY TVNWDDNEYH SNDNATYWQG YAGYPVIAVL MLQGKLPFNQ KLADNFKSVN WNEINSKFKR NYAKAATEVI KKKGLDENEV MAELGAVYED LKKLPITIKR GSLRPPKARK
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