Gene LGAS_0253 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLGAS_0253 
Symbol 
ID4438796 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus gasseri ATCC 33323 
KingdomBacteria 
Replicon accessionNC_008530 
Strand
Start bp285412 
End bp285864 
Gene Length453 bp 
Protein Length150 aa 
Translation table11 
GC content34% 
IMG OID639672112 
Producthypothetical protein 
Protein accessionYP_814099 
Protein GI116628927 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.00207506 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones53 
Fosmid unclonability p-value0.182428 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAT TACCACCGAT TCAGAAAATT TTAGAAGCTT ATACGGCGAT TGTGGATAAA 
CATGTGAATT TAACAAAAGA TCAGGCAGAA GTAGCTTCAT CTAATGGAGC AAAAACTTAT
ACAGTAAATT GGGATGATAA TGAGTACCAT TCAAATGATA ATGCAACTTA TTGGCAAGGA
TATGCCGGTT ATCCTGTAAT TGCCGTTTTA ATGCTACAGG GGAAATTGCC ATTTAATCAA
AAACTAGCTG ATAATTTTAA ATCCGTTAAT TGGAATGAAA TAAATTCAAA GTTTAAGCGT
AACTATGCCA AGGCTGCTAC TGAGGTTATT AAGAAAAAAG GGCTTGATGA AAATGAAGTA
ATGGCAGAAC TTGGAGCTGT TTATGAAGAC TTAAAAAAGT TACCAATTAC AATTAAGCGC
GGTTCTCTTA GGCCACCTAA GGCGAGAAAA TAA
 
Protein sequence
MKKLPPIQKI LEAYTAIVDK HVNLTKDQAE VASSNGAKTY TVNWDDNEYH SNDNATYWQG 
YAGYPVIAVL MLQGKLPFNQ KLADNFKSVN WNEINSKFKR NYAKAATEVI KKKGLDENEV
MAELGAVYED LKKLPITIKR GSLRPPKARK