| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LGAS_0222 |
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| Symbol | |
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| ID | 4438748 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactobacillus gasseri ATCC 33323 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008530 |
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| Strand | + |
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| Start bp | 256708 |
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| End bp | 258324 |
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| Gene Length | 1617 bp |
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| Protein Length | 538 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 639672082 |
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| Product | trehalose-6-phosphate hydrolase |
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| Protein accession | YP_814069 |
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| Protein GI | 116628897 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0366] Glycosidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00000721173 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.00000000000157233 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACACCAT GGTGGAAAAA AGCAGTTATT TACCAAATTT ATCCTAAGTC ATTTCAAGAT
AGTAATGGAG ACGGAATTGG GGATATTCCT GGGATTATCT CAAGACTTGA ATATTTAGAA
AAATTAGGAA TTGATGCAAT TTGGTTGTCG CCCGTTTATT TATCTCCTGG GATCGATAAT
GGGTATGATA TTTCTGATTA TCAAAAAATT GACCCACAAT ACGGGACAAT GAAAGATATG
GATAATCTAA TTAAAGAGGC TAAAAAACAT CATATACGGA TCGTTATGGA CCTTGTCGTA
AACCATACTT CTGATCAACA TCCTTGGTTT GTTGAAGCAA AAAAGAGCCA AGACAATCCA
TATCGTGATT TTTATATTTG GCGTGATCCA GTAGATGGAC ATGAACCAAA TGATTTAAAG
TCTGCTTTTT CAGGCTCAGC TTGGAAATTT GACGAAAAAA CAGGACAATA CTATTTGCAC
TTTTTTGCGG ATCAACAGCC AGACTTGAAT TGGAAGAATC CAGAACTAAG AAATAAAGTT
TATGACATGA TGAATTACTG GATTGATAAG GGGATTAGTG GCTTTAGAAT GGATGTAATC
GAGTTGATTG GTAAGGATCC CGATCAAAAA ATCCGTGAAA ATGGTCCCAT GCTTCACCCT
TATTTAAAAG AAATGAATGA ACATACCTTT GCTAATAAAG ATATGATGAC TGTAGGTGAG
ACTTGGAATG CAACGCCTAA AATTGCAGAA GAATATTCTG ATCCAGCGCG TCATGAATTG
TCGATGGTCT TTCAATTTGA AAACCAAGCT TTAGATCAAG AACCAGGAAA AGAAAAGTGG
GATGTAAGGC CGCTTGATTT AGGAGAATTG AAAAAGGTCT TAATTAAGTG GCAAACAGAG
ATTGATTTTA ACCATGCCTG GAATAGCCTT TTCTGGGAAA ACCATGATAT CCCACGTGTT
ATTTCACGTT GGGGAAACGA TCAAGAGTAC CGCGTTCAAT GCGCTAAAAT GTTTGCGATA
ATTTTGCACT TAATGCGTGG AACTCCTTAT ATTTATAATG GTGAAGAAAT TGGGATGACT
AACTGTCCTG TTAAGTCTAT TGATGAGGTC GAAGATATTG AAAGTATCAA TATGTATCAT
GAAAGGCTAG AGCAGGGGTA TAAGAGAGCT GATCTGATTA ATTCAATTAA CGTTAAAGGC
CGCGATAATG CAAGACGACC AATGCAGTGG TCTAATGAAG AGAATGCTGG ATTTACTAGT
GGAAACCCCT GGTTGAAAGT AAATCCAAAT TATCAAAAGA TTAATGTTAA AGCTGCTTTA
GCAGATCTAG ATTCTATTTT CTATACTTAT CAAAAACTGA TTAAGCTTAG ACATGAAAAT
CCTGTTGTAG TTGATGGAGA TTTTGAATTA GTTGAAAATA CTGGTGATAG TGTTTTAGCA
TTTTGGCGTA AACTAGGAAG TGAAAAGTGG CTTATTGTTG CTAATCTATC TGGTGATAGA
CAAAGGTTTA ACTTAGATAA TGATTTCAAA GAAGTTTTGA TTAGTAATTA TGAAAAGCAA
GATAGTTTAA AGAATATTAT TCTAAAGCCA TATGAAGCTT TTGCAGTTAA GGCATAA
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| Protein sequence | MTPWWKKAVI YQIYPKSFQD SNGDGIGDIP GIISRLEYLE KLGIDAIWLS PVYLSPGIDN
GYDISDYQKI DPQYGTMKDM DNLIKEAKKH HIRIVMDLVV NHTSDQHPWF VEAKKSQDNP
YRDFYIWRDP VDGHEPNDLK SAFSGSAWKF DEKTGQYYLH FFADQQPDLN WKNPELRNKV
YDMMNYWIDK GISGFRMDVI ELIGKDPDQK IRENGPMLHP YLKEMNEHTF ANKDMMTVGE
TWNATPKIAE EYSDPARHEL SMVFQFENQA LDQEPGKEKW DVRPLDLGEL KKVLIKWQTE
IDFNHAWNSL FWENHDIPRV ISRWGNDQEY RVQCAKMFAI ILHLMRGTPY IYNGEEIGMT
NCPVKSIDEV EDIESINMYH ERLEQGYKRA DLINSINVKG RDNARRPMQW SNEENAGFTS
GNPWLKVNPN YQKINVKAAL ADLDSIFYTY QKLIKLRHEN PVVVDGDFEL VENTGDSVLA
FWRKLGSEKW LIVANLSGDR QRFNLDNDFK EVLISNYEKQ DSLKNIILKP YEAFAVKA
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