| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LGAS_0206 |
|---|
| Symbol | |
|---|
| ID | 4440344 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Lactobacillus gasseri ATCC 33323 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008530 |
|---|
| Strand | + |
|---|
| Start bp | 238281 |
|---|
| End bp | 239051 |
|---|
| Gene Length | 771 bp |
|---|
| Protein Length | 256 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 639672066 |
|---|
| Product | Mg-dependent DNase |
|---|
| Protein accession | YP_814053 |
|---|
| Protein GI | 116628881 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0084] Mg-dependent DNase |
|---|
| TIGRFAM ID | [TIGR00010] hydrolase, TatD family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.000000791491 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 46 |
|---|
| Fosmid unclonability p-value | 0.0173908 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAGATTT TTGATTCACA TACGCACTTA AATGACGTGC CTTTTCGGGG AAAAGAAGAG
ATCTACCTTG ATCGAGCTAA AGAATTAGGT GTAGTAAAAA GTGCAGTTGC AGGACAAGAC
CCAGAATTTA ATGAGCGTGC GATTGATCTA AGTCAAAGAT TTGATAATTT ATACGCTATT
GTTGGTTACT GTCCTGATGT AGCTAAAGGC TATGATCAAA ATGCAGAAGA TGTATTAGTA
GAACAGCTTA AGAAGCCCAA AACTGTTGCT TTAGGAGAAA TTGGACTAGA TTATTACTGG
GATGAATCGC CAAGAGATGT TCAGCGAAAA GTTTTTGCAA GGCAACTTGA TTTAGCTCAT
AGCTTAAAGA TGCCAGTAAA TATTCATACT CGCGATGCTT TTGAAGATAC ATATCAAGTT
TTGAAAAATA GTCATGTGGG TGAATATGGC GGGATTATTC ATAATTTTAA TGGTGATCCA
GAATGGCTTA AAAAGTTTCT TGATTTAGGG ATGATGGTTT CATTTTCTGG GGTAGTTTCA
TTTACAAAAG CAATTGACGT ACATGCTTCT GCCAAAGTTG TGCCTTGGGA TAAATTTTTA
ATTGAAACTG ATGCCCCATA CTTAACGCCA AAACCATACC GCGGAAAGCA AAATGAAACA
GGATATGTAC GCTATGTTGC AGAGGCAATT GCTAAGTTGC GTGATGTATC GGTTGAAGAA
GTGGCAAAGC ACACATTTGA AAATACGATG AGGGCATATG GAATCAAATA A
|
|---|
| Protein sequence | MEIFDSHTHL NDVPFRGKEE IYLDRAKELG VVKSAVAGQD PEFNERAIDL SQRFDNLYAI
VGYCPDVAKG YDQNAEDVLV EQLKKPKTVA LGEIGLDYYW DESPRDVQRK VFARQLDLAH
SLKMPVNIHT RDAFEDTYQV LKNSHVGEYG GIIHNFNGDP EWLKKFLDLG MMVSFSGVVS
FTKAIDVHAS AKVVPWDKFL IETDAPYLTP KPYRGKQNET GYVRYVAEAI AKLRDVSVEE
VAKHTFENTM RAYGIK
|
|---|
| |