| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LGAS_0191 |
|---|
| Symbol | |
|---|
| ID | 4438837 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Lactobacillus gasseri ATCC 33323 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008530 |
|---|
| Strand | - |
|---|
| Start bp | 225343 |
|---|
| End bp | 226068 |
|---|
| Gene Length | 726 bp |
|---|
| Protein Length | 241 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 639672052 |
|---|
| Product | transcriptional regulator |
|---|
| Protein accession | YP_814040 |
|---|
| Protein GI | 116628868 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2188] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 64 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 53 |
|---|
| Fosmid unclonability p-value | 0.168496 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTGCGG AAGCAAAATA CTTAAAAGTT GCTCGAATTC TACAAAAAAG AATTGAAGAT
GGAGTCTACA AAACTCAAGC TCCCCTTCCT GACCAAAAAA CACTTGCAGA CGAATTACAA
GTAAGCCGTT TAACTGTCAA AAAAGCCTTA GATGGATTAC AAAGAAAGGG TCTTGTTTAT
AAAGAATCTG GTTTAGGAAC TTTTGTCTTA GGTCCAGTTC CAATTCAAGA TAAATTTGAT
TCACCAGCAA ATGCCTTTAG TGGCTTGGCT AACCTACTTG GATCAGATGA GGTTACTAGC
GATATTATTG AATTTAATGT TGAGTTTCCC AATGAAAATA TTCAACATTA CCTCAAATTA
AAGTCTAGCG ACCCAGTTTA TAATATCCGG CGTTTAAGAA GACTTAAAGG AAAGCCACTG
ATTCTTGAAC ACACTTTTAT GCCAGTTCAC TTAGTTCCTA ACTTAACTGA AGATATCTTA
CACAATTCTA TTTACAATTA TCTTCATCAA GACTTGAAAC TTAAGTTTGG CATTGCATAT
CGTAAAATCA AGGCTGTTAA AGCAGACGAT TGGGATCAAA AATATCTTAA AGCTAAAAAA
AATGACCCAA TTTTAGAGCT TGAGCAAATC GTATGGTTAA ATAATGGTCA ACCAGTTGAA
TATTCAACCA GTCGTAATCG CTACGATGAA CGAAATTATG TCGTTGTAGA GACAAGCAGC
TTTTAA
|
|---|
| Protein sequence | MTAEAKYLKV ARILQKRIED GVYKTQAPLP DQKTLADELQ VSRLTVKKAL DGLQRKGLVY
KESGLGTFVL GPVPIQDKFD SPANAFSGLA NLLGSDEVTS DIIEFNVEFP NENIQHYLKL
KSSDPVYNIR RLRRLKGKPL ILEHTFMPVH LVPNLTEDIL HNSIYNYLHQ DLKLKFGIAY
RKIKAVKADD WDQKYLKAKK NDPILELEQI VWLNNGQPVE YSTSRNRYDE RNYVVVETSS
F
|
|---|
| |