Gene LGAS_0166 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLGAS_0166 
Symbol 
ID4440520 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus gasseri ATCC 33323 
KingdomBacteria 
Replicon accessionNC_008530 
Strand
Start bp200961 
End bp201407 
Gene Length447 bp 
Protein Length148 aa 
Translation table11 
GC content35% 
IMG OID639672027 
Producthypothetical protein 
Protein accessionYP_814016 
Protein GI116628844 
COG category[S] Function unknown 
COG ID[COG2461] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.00000989028 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value8.66499e-20 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
TTGGACAGAT TGGAAGAATT ACCTATGGAT AATATTAATT TAGACGGTGG TCATCTCTCA 
CTTGAACAGT TAAATGCAAT CTTTAGAACT ATTCCACAAG AAATGGACGT CTTAGATGAA
AATGATCGCG TTGTCTGGTC ATCAATGAAT AAGAATCGCC TCTTCAAGCG AACCGAAAAA
GATATTGGTA AGACTGTTTT TGAGGTGCAT CCCGGCCACA GCCAAAAACA CGTTAAAGAA
GTTTTAAACC AAATGCACGC AGGCAATCGT AAAAATATTT CAATTATGAT CACTAAAGAT
GAGCAACCAA TAAATATTTC TTTTTATAGC CTTCATAACG AAGATGGAAA ATATATTGGT
TGTATTGAAG TAACGCAAGC AGTTAAAAAT TTGCAAGTTA AGGGCAGCAA ATTGCGCAAT
ATCTTAAATG TCCTTAAAAA GCACTAA
 
Protein sequence
MDRLEELPMD NINLDGGHLS LEQLNAIFRT IPQEMDVLDE NDRVVWSSMN KNRLFKRTEK 
DIGKTVFEVH PGHSQKHVKE VLNQMHAGNR KNISIMITKD EQPINISFYS LHNEDGKYIG
CIEVTQAVKN LQVKGSKLRN ILNVLKKH