Gene LGAS_0141 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLGAS_0141 
Symbol 
ID4440530 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus gasseri ATCC 33323 
KingdomBacteria 
Replicon accessionNC_008530 
Strand
Start bp155399 
End bp156595 
Gene Length1197 bp 
Protein Length398 aa 
Translation table11 
GC content34% 
IMG OID639672002 
Producthypothetical protein 
Protein accessionYP_813991 
Protein GI116628819 
COG category[S] Function unknown 
COG ID[COG2461] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones57 
Fosmid unclonability p-value0.546361 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGAAT TGGATAAACA ACGCCAAGAA TCCATTTTGA AAATTTTAAA TTTTATTCAA 
AATGGCGGAG AATTAGAAGA AGCTAAAAAA ATGTTTCAAG CTGCTTTTGA TCAGGTTGAT
GTGGCTGAAA TTACAGCAGC TGAAAGAGAG TTAATTGCTC AAGGACTAGA TCCAAGAAAG
ATTCAGTACT TGTGCAATGT TCATGCGGAT GTTTTTAAAG GCAATATTAA AGAAAATAAA
GAAAGTCCAG AGTTTGAAAC TCCTGGACAT CCTGTTCATA CTTTTAAACT AGAAAATATT
GTAATTAAAT CTTTAATTAA TGATGCCTTG CTTCCTGATT TGACTAAGTG GGAAGATGGA
TCTTCTGATG CTCTACCTAA ATTGAAGCGA GAGTTAAAAG ATCTGGCTAA AATTCACTAT
CACTATGCCC GTAAAGAAAC TTCTATGTTT CCAATTATGA CTAAGTATGG CATTACTGCT
CCACCTAAAG TTATGTGGGG TGTTGACGAT AAAATTAGAA AATTAATTGG TCAAGCTAAT
ATGCTTGTTA ATCAAAAAAA TGTGGACCAA AGTGAAGTTG CTAGTGTAAT AAAAAGTGCT
GCTCATGAAG TTCTTGAGAT GATTTTTAAA GAAGAAGAAA TTATGCTTCC GATGATTGAT
GAAGTTGCTA GTGAAGAAGA CTGGGGCAAT GTTAAAAATG AAGAAGAGCA AATTGGCTAT
ACTTTGATTC AAAAGCCGAT GAACTGGAAG CCGAAGATAA AAGAAAAAGT AGCCGGGCCA
ATCTCTTTAG ATAAGTTGAG CAGTTTAGCG CTGAATTTTG CGGAAGGTAG TTTAAATTTA
AAACAATTGT CGGCAATCTT AGATTTATTG CCATTTGCGA TAACTTTTGT CGATGAAAAT
GATAAGGTTG CATATTTTGG TGGTGGAGCA AATATTTTTC CGCATTCTAA AAATGCAATT
GGAAACAGTG TATATTCGTG CCATCTTCCT GAGAGTGTTC CTCGGGTTAA GAAAATTTTT
GATGATTTTC ATCAAGGAAA GAAAGATAAG TTCGAATTTT GGTTCGAGCC ACGGCATATG
GGGAGATATT TATATTTGCA ATATTTTGCT GTACGAAAAA ATGGACGGTA CTTGGGATGT
TTAGAAGTTG CTCAAGATGT AACTGAGATT AGAAGCTGGA AAAATGAAAG AAGATAA
 
Protein sequence
MKELDKQRQE SILKILNFIQ NGGELEEAKK MFQAAFDQVD VAEITAAERE LIAQGLDPRK 
IQYLCNVHAD VFKGNIKENK ESPEFETPGH PVHTFKLENI VIKSLINDAL LPDLTKWEDG
SSDALPKLKR ELKDLAKIHY HYARKETSMF PIMTKYGITA PPKVMWGVDD KIRKLIGQAN
MLVNQKNVDQ SEVASVIKSA AHEVLEMIFK EEEIMLPMID EVASEEDWGN VKNEEEQIGY
TLIQKPMNWK PKIKEKVAGP ISLDKLSSLA LNFAEGSLNL KQLSAILDLL PFAITFVDEN
DKVAYFGGGA NIFPHSKNAI GNSVYSCHLP ESVPRVKKIF DDFHQGKKDK FEFWFEPRHM
GRYLYLQYFA VRKNGRYLGC LEVAQDVTEI RSWKNERR