Gene LGAS_0139 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLGAS_0139 
Symbol 
ID4440563 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus gasseri ATCC 33323 
KingdomBacteria 
Replicon accessionNC_008530 
Strand
Start bp154040 
End bp154753 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content35% 
IMG OID639672000 
Productorganic radical activating protein 
Protein accessionYP_813989 
Protein GI116628817 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0602] Organic radical activating enzymes 
TIGRFAM ID[TIGR02491] anaerobic ribonucleoside-triphosphate reductase activating protein 


Plasmid Coverage information

Num covering plasmid clones48 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones56 
Fosmid unclonability p-value0.41303 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAGAAA AAGATAAAAA CAGTCAAGAA GGTCCTGATG TTCGAGGTAA CTTAATTAAA 
GTTAATGTTG GCGGCGATAC AATTTTTGTT GATTCTAACC AATATAAGCC ACAAGTTGAA
CATGCTAAAA AATTAAAGCA GCAACATAGG AAACCTAAAA ATCCTAAACC ACAAGAATGG
ATATCGGAAG AATATTCTAA GCATAAAATT GCGGACTATA AACCATTTAA CTTTGTTGAT
GGGGAAGGCG TTAGATGCAG TTTATATGTA AGTGGATGTT TATTTGATTG TCCTGGATGC
TATAATTTGG CAGCGCAGAA CTTTAATTAT GGGCGTCCTT ATACACAAGA GTTAGAAGAT
AAAATTATTG AAGATATGTC TCAATCTTAT GTGCAAGGAT TGACTTTATT GGGCGGAGAA
CCATTTTTGA ATACTTGGGT TTGCTTAAAA TTAATTAACC GCGTCCGCAA AGAATTTGGG
CATACTAAGG ATATTTGGTC CTGGTCAGGT TATACTTGGG ATGAACTCCA AAAAGAGACT
CCGGATAAGA AAGAAATGCT TTCAAAAATT GATATTCTGG TTGATGGACG CTTTATGGAT
GACTTAAAGG ATCTTACTTT ACAGTTCCGT GGTTCAAGTA ATCAAAGAAT TATTGATGTT
CAAAAGTCAC TTAAAGCTAA GAAAGTCGTT ATTTGGGACA AGCTAGTTAG ATAA
 
Protein sequence
MPEKDKNSQE GPDVRGNLIK VNVGGDTIFV DSNQYKPQVE HAKKLKQQHR KPKNPKPQEW 
ISEEYSKHKI ADYKPFNFVD GEGVRCSLYV SGCLFDCPGC YNLAAQNFNY GRPYTQELED
KIIEDMSQSY VQGLTLLGGE PFLNTWVCLK LINRVRKEFG HTKDIWSWSG YTWDELQKET
PDKKEMLSKI DILVDGRFMD DLKDLTLQFR GSSNQRIIDV QKSLKAKKVV IWDKLVR