Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LGAS_0131 |
Symbol | |
ID | 4440555 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus gasseri ATCC 33323 |
Kingdom | Bacteria |
Replicon accession | NC_008530 |
Strand | + |
Start bp | 143968 |
End bp | 144837 |
Gene Length | 870 bp |
Protein Length | 289 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 639671992 |
Product | ABC-type phosphate/phosphonate transport system, permease component |
Protein accession | YP_813981 |
Protein GI | 116628809 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG3639] ABC-type phosphate/phosphonate transport system, permease component |
TIGRFAM ID | [TIGR01097] phosphonate ABC transporter, permease protein PhnE |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.0113761 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 0.00000772966 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | GTGAAACTTC TCAAGCCGTG TTTGACGATA TCTACAATGG CGGAAACGGC AAGAAAGGGG AAGAAGATGC CTAAATCTAA GGAACAGCAT TTAGCTGAAT TACCTAAAAA GAAATTTAAG ATTATGAACC TTGTGTGGGT CGTAATTATG GTTTTAGGTC TCTTTCTTTC GGTAAATGTA ACCAATACGC ACATTAGTGT TTTGTTTAAC AACTTTAGCC AATTTACCGA TATTTTTGTA CAAATGTGCC ACCCAGACTG GGGATACGCT GCTACAGCAG TTCCGCTTTT AATTGAAACA ATTAAAATGG CTATCTTAGG AACTGTGATT GGTTCAGCTA TTGCATTTGT ATATTCACTT TTAATTGCGA GAAATATTGT TAAAAATAAA GCAGTTACAG GTATTTTAAG AGTGATCATG AACATTGTTA GAACTATTCC AGATTTACTT TTGGGTGCAA TTTTTGTTGC AATTGTTGGT ATCGGTCCAG TTGCCGGTGT TTTAGCCTTA TCAGTATTTA CTTTTGGGGT AGTTGTTAAA TTGTTCTATG AGGCCATTGA AACCATTGAT CCAGGTCCAA TTGAAGCTTT AACTGCTGTT GGTGCAAACA AGCTTCAAAT TATCCACTTT GCTGTGATGC CGCAAATTAT TACTTACTTT ATTTCTTATG TTTTATATGC GTTTGAAATC AATGTCAGAG CTTCAACAGT TCTTGGATAT ATCGGTGCTG GTGGTATTGG TCTTTACTTG CAACAAACTC TACAAGTCTT TGACTATGCT AAAACTGGTC TAATTATTTT AATTATTATC GTCGTCGTAG TTCTTATCGA CTATGTTTCT ACTAAATCTC GGGAGGCGTT GATGAAATAA
|
Protein sequence | MKLLKPCLTI STMAETARKG KKMPKSKEQH LAELPKKKFK IMNLVWVVIM VLGLFLSVNV TNTHISVLFN NFSQFTDIFV QMCHPDWGYA ATAVPLLIET IKMAILGTVI GSAIAFVYSL LIARNIVKNK AVTGILRVIM NIVRTIPDLL LGAIFVAIVG IGPVAGVLAL SVFTFGVVVK LFYEAIETID PGPIEALTAV GANKLQIIHF AVMPQIITYF ISYVLYAFEI NVRASTVLGY IGAGGIGLYL QQTLQVFDYA KTGLIILIII VVVVLIDYVS TKSREALMK
|
| |