Gene LGAS_0127 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLGAS_0127 
Symbol 
ID4440551 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus gasseri ATCC 33323 
KingdomBacteria 
Replicon accessionNC_008530 
Strand
Start bp140344 
End bp141147 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content38% 
IMG OID639671988 
Productprotein tyrosine/serine phosphatase 
Protein accessionYP_813977 
Protein GI116628805 
COG category[T] Signal transduction mechanisms 
COG ID[COG2365] Protein tyrosine/serine phosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000401238 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.000000000048511 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGCGAAA ATTATGAGAC AAAATTAATT GGCATCCAAA ATGGTCGCAA TTTCCGCGAA 
CTTGGGGGCT ATAAAACCGT ATCTGGTCAA ACCATCAAAT ATAATAAACT GCTTAGAACC
GGAAATTTAG CTGATCTTTC TTCATCAGAC TTAGATTTAC TGCAAAAACA CGGTGTAAAA
TACGACGTTG ACTTTAGAAC CGAAAAAGAA AAGACCGAGC ATCCTGATCG TGTACCTGAA
GGTGCAAAAT ATATTTTCGA TCCAGTTTTT AGTGACGACT TAACTAACGC TTCTAAAGGG
ATTTTTGCTT TAGAAGAAAA CGCTGAAAAA GATCCTGAAT TTGGCTTTAA GCATATGTTC
TTTGCTTATG AAGATATGAT TAATGGACAA ACAGCTCAAA AAGCCTATCG TAAGTTTTTT
GATCTTTTAC TTGCTAACGA TCAAGAGAAA AATGCCCTGC TCTTCCACTG TACCGCAGGA
AAAGACAGAA CCGGATTTGG TGCATTGCTA GTTTTATCAG CATTAGGTGT ACCTTTTACT
ACTATCAAAT ATGACTATAC TCTAACAAAT GTTACTACTA AGAGCTTCGT TGATGGGATG
CTTAAGCAAG CTGCCGCTGA TGGCTCTAGC AAGCGCGTCT TGCAATCTAT TAAGGACATT
CAGTCAGTCT ATCCAGAATA CTTAGATCAC GCCATACACG TTCTAAACCA GCAATACGGC
GGAATTAATG AATACCTTCG TTCTACCATG AAGCTCTCAA GCCGTGATAT CATGGATCTT
AGGAGAATCT ATCTTAAGGA TTGA
 
Protein sequence
MSENYETKLI GIQNGRNFRE LGGYKTVSGQ TIKYNKLLRT GNLADLSSSD LDLLQKHGVK 
YDVDFRTEKE KTEHPDRVPE GAKYIFDPVF SDDLTNASKG IFALEENAEK DPEFGFKHMF
FAYEDMINGQ TAQKAYRKFF DLLLANDQEK NALLFHCTAG KDRTGFGALL VLSALGVPFT
TIKYDYTLTN VTTKSFVDGM LKQAAADGSS KRVLQSIKDI QSVYPEYLDH AIHVLNQQYG
GINEYLRSTM KLSSRDIMDL RRIYLKD