Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LGAS_0114 |
Symbol | |
ID | 4440486 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus gasseri ATCC 33323 |
Kingdom | Bacteria |
Replicon accession | NC_008530 |
Strand | + |
Start bp | 129553 |
End bp | 130272 |
Gene Length | 720 bp |
Protein Length | 239 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 639671975 |
Product | transcriptional regulator |
Protein accession | YP_813964 |
Protein GI | 116628792 |
COG category | [K] Transcription |
COG ID | [COG2188] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 44 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 1.19312e-17 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAAAGAC CACTTTATCA GCAAGTGATT TCAGATCTTG AAAAGAAAAT TAAGACTGAA ATGAAGCCAA ATGATCGACT GCCTAGTGAA AGACAACTTT TAAAAGAATA CGGTGTGAGT CGAAATACAA TTCGATTAGC ATTAAATAAT TTAGAAGAGC GAGGCATTAT TTATCGATTG CATGGAAAAG GTACATTTGT TTCCACAATT TATCTAGATC AGACCAACTT AGGAAGTATG TACTCATTTA GTGAACAGAT GTCAGAAGCA GGACGCAAGC CAACAACACA AAACCGCACA TTAGAGCTTG TTGTTCCCGA TGCAGCTGTC GCAAATCAGC TTAATTTGAA AGCTGGAGAA AAAGCGTACA AGTTAGTTAG GTTACGTCTA GCTGATGGAG TACCACTAAT GTATGGAGAA ACATATTTAC CAGAAAGTAT TTTTCCGGAT CTAAAAATGT CGGATTTAAA TGAAAATCAT TTGTACACCG TTATGAAGCG AAAATACAAT GAACAAAGTG TTCTTGCCTT TGAAGATGTA CAAGCGGTTA ATTTAGATAA AAGAGACAGT AAGATTTTAG GCGTAAAGCC CGGGGATGCG AGTTTAAAAA TTTTTAGACG GGCAATCAAT GATAAAAACG TGCCAATTGA ATTTACCATT TCTCTAGCTA GAGGAGATAG ATTCATTTAC CGATCACGGC AATATAATCA TTTAGTTTAG
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Protein sequence | MKRPLYQQVI SDLEKKIKTE MKPNDRLPSE RQLLKEYGVS RNTIRLALNN LEERGIIYRL HGKGTFVSTI YLDQTNLGSM YSFSEQMSEA GRKPTTQNRT LELVVPDAAV ANQLNLKAGE KAYKLVRLRL ADGVPLMYGE TYLPESIFPD LKMSDLNENH LYTVMKRKYN EQSVLAFEDV QAVNLDKRDS KILGVKPGDA SLKIFRRAIN DKNVPIEFTI SLARGDRFIY RSRQYNHLV
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