Gene LGAS_0097 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLGAS_0097 
Symbol 
ID4440504 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus gasseri ATCC 33323 
KingdomBacteria 
Replicon accessionNC_008530 
Strand
Start bp109292 
End bp110260 
Gene Length969 bp 
Protein Length322 aa 
Translation table11 
GC content36% 
IMG OID639671958 
Producthypothetical protein 
Protein accessionYP_813947 
Protein GI116628775 
COG category[S] Function unknown 
COG ID[COG4086] Predicted secreted protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones57 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value0.000152524 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAAAAAA TACTAACCGC GCTTGTCGCT ATCTTAACAA GCGGAATCTT AGGATTAACT 
GCTATTAGTA ATACTAAAAC AGTTAAGGCA AATGAAAATG ACACTCCTGT CGTAACTTTA
GGTACATCCC TTACCTCTTC TCAAAAACAG GGGACAATTG ATACTTTAAC GCAGTCCTTA
AATGGTAGTA ATTATACCAC CATCACTATT ACTGGCGCAG ATCTTGTAAA ATATCTTAAT
CCTTCTGGCT ATGACTTCAC TAATAATTCA GGTGTTTGGT CTAGCGCTAT GATCCAAAAA
ACTAGCTCTG GTAGCGGGAT TAATGTTCAC ATTTTACCTT ATAATGGTCA CAATAACATT
ACAACTATTA CTGCTAACCA GTACAAAAAT GCCGCTTTAA CTGCTGGTAT TTCTGACGCG
GACATTTACG TCACTTCTGC TACGCCAATT GATGGGTCAG GTGCTCTAGC TGGTGTTTAT
GCTGCCTATG CTAAAAATGG CAATTCTTTA AATCAAAATC AAATTAATGC AGCACAAACT
GAAATGAATA CCTTAAGTAA GATTACTAGC CAAAATAAGG GAAAAGATGG CTATTCTGAC
GCTCAATTAA ACAATGCCGT AGCTGGTGCA AAAAAAGAAA TGGCTAAACA GGGACAAAAT
ATTTCCGATA GCCAAATTAG AGATATCGTT AACAATCAAA TTAACATTAA CCACCTAGGC
GACACCATTA CTAATAATCA AAAAGAACAA ATTATTAATG TCTTAATTAA GATTAAAAAT
TCTGGTGCTT TAAAAGACAA AAACTTCCAG CAACAAGCTG GCCAACTGGC AGACCAAATT
CAATCTGGTG CTAAGAATAT CTTTTCAAAA TTTAATACAC CTGAAACTCG TAACTGGTTC
CAAAAATTAA TTGATTCAAT CGTTAGCTGG TTTAGAAGTA TCTTTGGCGG TGTCATTGTC
TTAAACTAA
 
Protein sequence
MKKILTALVA ILTSGILGLT AISNTKTVKA NENDTPVVTL GTSLTSSQKQ GTIDTLTQSL 
NGSNYTTITI TGADLVKYLN PSGYDFTNNS GVWSSAMIQK TSSGSGINVH ILPYNGHNNI
TTITANQYKN AALTAGISDA DIYVTSATPI DGSGALAGVY AAYAKNGNSL NQNQINAAQT
EMNTLSKITS QNKGKDGYSD AQLNNAVAGA KKEMAKQGQN ISDSQIRDIV NNQININHLG
DTITNNQKEQ IINVLIKIKN SGALKDKNFQ QQAGQLADQI QSGAKNIFSK FNTPETRNWF
QKLIDSIVSW FRSIFGGVIV LN