Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LGAS_0097 |
Symbol | |
ID | 4440504 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus gasseri ATCC 33323 |
Kingdom | Bacteria |
Replicon accession | NC_008530 |
Strand | - |
Start bp | 109292 |
End bp | 110260 |
Gene Length | 969 bp |
Protein Length | 322 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 639671958 |
Product | hypothetical protein |
Protein accession | YP_813947 |
Protein GI | 116628775 |
COG category | [S] Function unknown |
COG ID | [COG4086] Predicted secreted protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 57 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 0.000152524 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAAAAAA TACTAACCGC GCTTGTCGCT ATCTTAACAA GCGGAATCTT AGGATTAACT GCTATTAGTA ATACTAAAAC AGTTAAGGCA AATGAAAATG ACACTCCTGT CGTAACTTTA GGTACATCCC TTACCTCTTC TCAAAAACAG GGGACAATTG ATACTTTAAC GCAGTCCTTA AATGGTAGTA ATTATACCAC CATCACTATT ACTGGCGCAG ATCTTGTAAA ATATCTTAAT CCTTCTGGCT ATGACTTCAC TAATAATTCA GGTGTTTGGT CTAGCGCTAT GATCCAAAAA ACTAGCTCTG GTAGCGGGAT TAATGTTCAC ATTTTACCTT ATAATGGTCA CAATAACATT ACAACTATTA CTGCTAACCA GTACAAAAAT GCCGCTTTAA CTGCTGGTAT TTCTGACGCG GACATTTACG TCACTTCTGC TACGCCAATT GATGGGTCAG GTGCTCTAGC TGGTGTTTAT GCTGCCTATG CTAAAAATGG CAATTCTTTA AATCAAAATC AAATTAATGC AGCACAAACT GAAATGAATA CCTTAAGTAA GATTACTAGC CAAAATAAGG GAAAAGATGG CTATTCTGAC GCTCAATTAA ACAATGCCGT AGCTGGTGCA AAAAAAGAAA TGGCTAAACA GGGACAAAAT ATTTCCGATA GCCAAATTAG AGATATCGTT AACAATCAAA TTAACATTAA CCACCTAGGC GACACCATTA CTAATAATCA AAAAGAACAA ATTATTAATG TCTTAATTAA GATTAAAAAT TCTGGTGCTT TAAAAGACAA AAACTTCCAG CAACAAGCTG GCCAACTGGC AGACCAAATT CAATCTGGTG CTAAGAATAT CTTTTCAAAA TTTAATACAC CTGAAACTCG TAACTGGTTC CAAAAATTAA TTGATTCAAT CGTTAGCTGG TTTAGAAGTA TCTTTGGCGG TGTCATTGTC TTAAACTAA
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Protein sequence | MKKILTALVA ILTSGILGLT AISNTKTVKA NENDTPVVTL GTSLTSSQKQ GTIDTLTQSL NGSNYTTITI TGADLVKYLN PSGYDFTNNS GVWSSAMIQK TSSGSGINVH ILPYNGHNNI TTITANQYKN AALTAGISDA DIYVTSATPI DGSGALAGVY AAYAKNGNSL NQNQINAAQT EMNTLSKITS QNKGKDGYSD AQLNNAVAGA KKEMAKQGQN ISDSQIRDIV NNQININHLG DTITNNQKEQ IINVLIKIKN SGALKDKNFQ QQAGQLADQI QSGAKNIFSK FNTPETRNWF QKLIDSIVSW FRSIFGGVIV LN
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